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Simple sequence repeat (SSR)
>UN00297
AAAGAAAGAAGCATTAGTAGTGCAATATTTGGGTCTCAGCTAAAGCTGGAAACAATTTATCAGTTAAACAGAAGTAATCATGTCTTTTTCAAGG
ATTAAGAAAGCTTTATCACAACCAAATTTGAACCATCTTTAACACCAATGTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTAACACTTCACTAAAGAGTGGCAAAAAGAAAAAAGAAATTACAAAATGGAGCAGGCCTTTTGTACTTTTCCCTTCTTTT
TCTTCTGCTTTGGAGGTTGAAGTACCACTCTAATCGCTGCATCAAACACCCCCTTCACGTTCTCCTGTGATTTTGAACTGCACTCGATGTACGA
AGGAGCTCCAATTAGCTTCATTAGCTCCTCGCCCTGAGCAGTGGTAATAGGTACAGCACCAGGGTGGTCAACAAAGAACTGTTTGTCATCCCTA
AGATCTAGTTTGGTTCCAACAAGAACAATTGGGACACCAGGGGCATAGTGAGTCAGCTCAGGGATCCACTTCTTGGAGACATTCTCATAACTAG
CCTTACTGATGAGGGAGAAGG |
Primers for UN00297 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCAATATTTGGGTCTCAGC |
58.723 |
20 |
AGTACAAAAGGCCTGCTCCA |
59.875 |
20 |
249 |
21 |
269 |
2 |
GTGCAATATTTGGGTCTCAGC |
59.588 |
21 |
AGTACAAAAGGCCTGCTCCA |
59.875 |
20 |
250 |
20 |
269 |
3 |
TGCAATATTTGGGTCTCAGC |
58.723 |
20 |
TACAAAAGGCCTGCTCCATT |
59.708 |
20 |
247 |
21 |
267 |
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