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Simple sequence repeat (SSR)
>UN27432
ACCACACGAACACAGGGACCTCTCGAATCTCCTCTCTCTCTCTCTATATATATATGGCGCCGACAGTTCAAACGGCGGTAGTTAACACCAACCG
CGGCGATGGAAGAATCAAAGAAACCCGTTACAGAGGAGTAAGAAAGAGGCCGTGGGGACGTTACGCCGCCGAGATCAGAGATCCGTACAAGAAG
ACACGTGTATGGCTCGGAACCTTCGATACTCCAGAAGCAGCCGCTCGTGCCTACGACAGAGCCGCTCTTCGCTTTCGCGGCGCTAAAGCCAAAA
CCAATTTCCCTTATACTTACGTAGTCGACAACAACGAGAGCCCGACGCAAAGCAGCACCGTCGAATCATCGTCGATTCTGGATCTCAATCTCGG
ATCCGTTGGTTCCATATTCCCTTTCCCGGAGGTTCAGGTCAAGCATGGGATGATTTTGTTCGGTGAAGAGTCGACGAGGAGTGAATCGGACTCG
TCGTCTGTGGTGATGGATCTGAGTCCGGAGAGACGGTCACGTGTGTTCTTGGATTTGGATCTTAATCTCCCTCCAAAGCCTGAGGACTAAGATG
AATTATCAAATGGTCTGATTCGAGAGTGACTACTATAGTTGAAGCTTGTCTTGTTTATTATTAAGTTGGTGCCAATTTTTTAAAAAATATTTTG
GGTCAGCAGGAAACTAAAAATAATGTTAGTGTCGAGAATGTTTTGTTCTCATCTGCTGTTGTTTATCGATTAATTGTAACGTTTTTGTTTAATT
TTCTGATCAACAAAAATTTTAGTAAATCTGTTTTGGCATCTATC |
Primers for UN27432 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAACACAGGGACCTCTCGAA |
60.238 |
20 |
TCTTTGATTCTTCCATCGCC |
60.155 |
20 |
108 |
8 |
115 |
2 |
GAACACAGGGACCTCTCGAA |
60.238 |
20 |
TACGGATCTCTGATCTCGGC |
60.326 |
20 |
174 |
8 |
181 |
3 |
GAACACAGGGACCTCTCGAA |
60.238 |
20 |
GAAGGTTCCGAGCCATACAC |
59.556 |
20 |
205 |
8 |
212 |
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