 |
Simple sequence repeat (SSR)
>UN27658
CCATTGGGCGTTGTCAGCTAAAGCTTCAAAGCTTGTTCTTCTAAGCTGAATTGATAAAAACCCATGGCCTTATGAAGTTCACCGTCCTAATCCC
CAGCTCCAGGTCTCCTTCATTCTTCTCTTTCCAGCTCCTTGTGTGGTTGCGGATTTCTCAGGCGGAGGGAATTTGAGAATTTAGGGTTTCATGA
TTCATTGTATTCCCCAAAATTGATCTTAGGGTTTGCTCTGTAATGGAATAGCGCCTCGTCTCTCTTGTAATTGGCGTCTTCTTCTTCTTCTTAG
CTGACACGATGAACCTGGATTTGAACCTAGGCCCTGGTCCCGAGTCAGATCTCCAGCTGCTGTCGTCAAACGAAACTGTCAACTTGGCTGATTG
GACTATTACCAACCCATCTCACAGATCCTCCTCTGAAGCTACTGTGACCAGGATCAGAACCCGGCACAGGACGCGGTTCAGACAGCTTAACCTC
CCCATCCCTGTTCTCTCTGAAACCCACGCCATGGATATAGAGCTGAACCAGTTGATGGGAAGTGGAGCTGCTTTGCAGACTGGGGAAGGTAGTG
AAAGAGGCAATGAGGATCTGAAAATGTGTGAGAACGGAGGAGAAGCTATTGGGGATGGTGTATCAGAGAAGAAAGGGGATGTTGAGAAGAGCAG
TGGCGGCGGCGGCGACGGGAACTTTTTCGATTGTAATATATGTTTGGATTTGTCAAAGGAGCCGGTTCTCACCTGTTGTGGCCATCTCTACTGC
TGGCCTTGTCTGTTCCAATGGTTACATATCTCTGACGCCAAGGAATGTCCTGTTTGCAAAGGAGAGGTGACTGCTAAAACCGTGACGCCGATAT
ACGGGCGTGGGAACCATAAGAGAGAAGTCGAGGAGAGTTTAGATACCAAGATCCCTATGAGACCGCATGCTAAACGCATCGAGAGTTTGAGGAA
TACGATTCAAAGGTCTCCTTTTACAATACCGATGGAGGAGATGATTAGACGTATACAGAGTAGGTTTGAGAGGGACTCAACCCCTGTCCCTGAT
TTTAGCAACCGGGAGGCTTCAGAAAGAGTGAACGATAGAGCCAACTCGATTCTTAACCGGTTGATGACTTCTAGGGGAGTTCGATCAGAGCATA
ACCAGTCTAGTGCTGCTGCAGCAGCGGCAGCAGCTGAGGATATTAATCTAAGTCCAGACATTGCTGCTCCTGATCTTGAAGGAGAAACCACCAC
GAGATTCCATCCTCTGTTGATCAGGAGACAGTTACAGTCACACAGAGTGGCGAGGATCTCGAATTTCACTTCTGCATTGAGTTCTGCCGAGCGG
CTTGTGGATGCGTATTTTAGAACTCATCCGTTGGGGAGGAACCACCACAACCACCAAGAGCTAAACCATCATTCTCCTGTTGTGGTTGATGATA
GAGACTCTTTCTCAAGCATTGCAGCTGTTATAAACTCTGAGAGTCAAGTGGACACTGCAGTTGAGATTGATTCCATGGTCACTCTTTCCACATC
TTCTTCGAGGAGAAGGAATGAGAATGGGTCGAGGGTTTTTGATAGACAGTGCTGATTCTCGCCCGCCTAGGAGAAGGAGATTTACTTGAAACAA
AAGCTTTCAATCTGTTGGAAGAAGATGATGATGATGAGGAAGGAGGAGGGGAGGAAGAAGATTGTAACTGTATTTTTCTTTTGTTGCTTGTTGG
TTTGTTGTATTTTTGATTTGTAATTTTCTCAATAGGGATGGTATTTTTAAT |
Primers for UN27658 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAATGGAATAGCGCCTCGTC |
60.196 |
20 |
GGTTAAGCTGTCTGAACCGC |
59.882 |
20 |
240 |
229 |
468 |
| 2 |
TAATGGAATAGCGCCTCGTC |
60.196 |
20 |
GCGTGGGTTTCAGAGAGAAC |
59.851 |
20 |
271 |
229 |
499 |
| 3 |
AGTTCACCGTCCTAATCCCC |
60.19 |
20 |
ACCAGGGCCTAGGTTCAAAT |
59.827 |
20 |
245 |
76 |
320 |
|
|
