 |
Simple sequence repeat (SSR)
>UN27701
AGGTCAAACTCGGGTGTGCGTCCTCCATCCATCCATCCATGATTTTATTATCCCTCACGCCGGTGGTGGTGGTGGTGGTGGTGGAGGCTAGTGC
TTCTTCACTGCGGCTACCGCGACCATATTCAGTGTTCTCTTATACCACCACTTGTCGTCGGTTGAGATCCATCCCTTTCCCTTTCCCTTTCCCT
TTCCCTTTCTCTTCTCTCACATGCTCTTGTCTCAATACCAATCCCACTTCCGAGGAGAAAGAAGAAGAAGAAGAAGAAGAAAAGGTGGTGGGGT
TGTCGGTTTTGGGATCAGAGATTCCATGGGAAGACAATAACATATGGAGCACATTCGCTCTTTACATGTTCTGCCTCCATATTCCTCTCAGTTT
TGGTGGTTTATCTCTCCTTTCTCGCCTCCTCCACCTCCCTCTTCTCCATCCTCAGTCCCAAGTGCTATCCCTTGTACTTCTCCAAATGCTCGAA
CTTTCACTCACCCTCTTCCTTCTGACGATTACTGCCAAGCCTCAATTCAATTCTATCCACTTTCTTAACGCTGCTAACTCTACCCAACAAGGCA
GAAACTGGTTGGTTGGATCAGCTTTGGGTTTCGCAACCCTTGTGTCTTTTATCTTCCTCACTTCACTCGTAGCTGATCAACTCTTCCCTTCTCA
GGATGTGCGCAACTCGGATTTGAACAAGATCATTGAAAGCGGGGAGGTGTCCAGATTCGGCTGTTTTGCTCTCTACTGCCTTGTTGCTCCCTTT
CTTGAGGAGATTGTGTACAGACGTTTTCTACTCACCTCCTTAGCTTCCACTATGGAATGGAGCAAGGCCCTTGTTATCAGCTCACTAGTGTTTG
CAGCATCTCACTTCTCTGCGGTGGATTTTGTGCAGCTGTTTGGGATTGGTTGCGTTCTTGGGGGATGTTACAGCTGGTCAGGAAACTTAGCCTC
CTCGGTGGTCGTCCACTCCTTGTACAATGCCCTGACACTCCTCCTTGCGCTACGTTCTTAACCTCAAGATGAGAGAGAGGTGGAGCCATTTCCC
TTGTCTGTGGAATCTCTTTTTATCTTTCTTAAAGAAGACAGCGTATAAACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTAAGAGAGAAT
CTTGATCCCTTTTCAGTTTAATAAAAAGTGTATTTGAT |
Primers for UN27701 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCATCCATCCATCCATGATT |
60.368 |
20 |
TCTCTGATCCCAAAACCGAC |
60.05 |
20 |
279 |
25 |
303 |
| 2 |
CCATCCATCCATCCATGATT |
60.368 |
20 |
CTGATCCCAAAACCGACAAC |
60.353 |
20 |
276 |
25 |
300 |
| 3 |
CCATCCATCCATCCATGATT |
60.368 |
20 |
ATCTCTGATCCCAAAACCGA |
59.483 |
20 |
280 |
25 |
304 |
|
|
