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Simple sequence repeat (SSR)
>UN27701
AGGTCAAACTCGGGTGTGCGTCCTCCATCCATCCATCCATGATTTTATTATCCCTCACGCCGGTGGTGGTGGTGGTGGTGGTGGAGGCTAGTGC
TTCTTCACTGCGGCTACCGCGACCATATTCAGTGTTCTCTTATACCACCACTTGTCGTCGGTTGAGATCCATCCCTTTCCCTTTCCCTTTCCCT
TTCCCTTTCTCTTCTCTCACATGCTCTTGTCTCAATACCAATCCCACTTCCGAGGAGAAAGAAGAAGAAGAAGAAGAAGAAAAGGTGGTGGGGT
TGTCGGTTTTGGGATCAGAGATTCCATGGGAAGACAATAACATATGGAGCACATTCGCTCTTTACATGTTCTGCCTCCATATTCCTCTCAGTTT
TGGTGGTTTATCTCTCCTTTCTCGCCTCCTCCACCTCCCTCTTCTCCATCCTCAGTCCCAAGTGCTATCCCTTGTACTTCTCCAAATGCTCGAA
CTTTCACTCACCCTCTTCCTTCTGACGATTACTGCCAAGCCTCAATTCAATTCTATCCACTTTCTTAACGCTGCTAACTCTACCCAACAAGGCA
GAAACTGGTTGGTTGGATCAGCTTTGGGTTTCGCAACCCTTGTGTCTTTTATCTTCCTCACTTCACTCGTAGCTGATCAACTCTTCCCTTCTCA
GGATGTGCGCAACTCGGATTTGAACAAGATCATTGAAAGCGGGGAGGTGTCCAGATTCGGCTGTTTTGCTCTCTACTGCCTTGTTGCTCCCTTT
CTTGAGGAGATTGTGTACAGACGTTTTCTACTCACCTCCTTAGCTTCCACTATGGAATGGAGCAAGGCCCTTGTTATCAGCTCACTAGTGTTTG
CAGCATCTCACTTCTCTGCGGTGGATTTTGTGCAGCTGTTTGGGATTGGTTGCGTTCTTGGGGGATGTTACAGCTGGTCAGGAAACTTAGCCTC
CTCGGTGGTCGTCCACTCCTTGTACAATGCCCTGACACTCCTCCTTGCGCTACGTTCTTAACCTCAAGATGAGAGAGAGGTGGAGCCATTTCCC
TTGTCTGTGGAATCTCTTTTTATCTTTCTTAAAGAAGACAGCGTATAAACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTAAGAGAGAAT
CTTGATCCCTTTTCAGTTTAATAAAAAGTGTATTTGAT |
Primers for UN27701 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GACACTCCTCCTTGCGCTAC |
60.02 |
20 |
TGAAAAGGGATCAAGATTCTCTC |
58.837 |
23 |
170 |
974 |
1143 |
2 |
AGCCATTTCCCTTGTCTGTG |
60.111 |
20 |
TGAAAAGGGATCAAGATTCTCTC |
58.837 |
23 |
120 |
1024 |
1143 |
3 |
GACACTCCTCCTTGCGCTAC |
60.02 |
20 |
CTGAAAAGGGATCAAGATTCTCTC |
59.741 |
24 |
171 |
974 |
1144 |
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