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Simple sequence repeat (SSR)
>UN27728
GCTTTCTCCCTTCTCATTCAAACAGGAGAGAGAAGTTAGTAAACTTTCGAGCTGAGAATAATAATAATAATAATATCAGCAGAAGCTATCCCCG
CCACGCCGCCGCCACTTCTCGCTACCGGAGAAACCATTCTAAACATAATTAAAATTTAAAAACAAAAAACAGTCTCTTTCCTTCTTTCTTTCTT
TGTCTGAATATTATTCCTTCTGTACACATGTTGTGTAACAGTTGAGCAGTTGCATGCCCATCACTTTCTTTCTCATTTCCTGATCATAAGCTTA
TAACAAAACCAAAAGCACAGAGCTTAAAAAAGAAGAAGATTTATTTTGTACAAGGCTGAAACGACACCTTCTCCCGTCGTTTTGGTGATAGCTC
GAGATCCGTGTTTCTTTCCTTGGCTTTTGAGCTTTTTTTTTTTATATACAACTATTTCGATGAGAGTTATCAGTGGGATTACTGTATAAATTTA
CAAAGTAATGATGAAGAAGTTGAAGCTTCGGAGAAGTGGCTTTGAGGTCGGCCAGATTAAGATTGCCAGCTTATTTGGCTGAAAAATTGCATAC
TTGGAGTGGGATGTGTGTTCTCTTCTATCAGGCTAAGAAGAACTCTGTTTTTTTTTCCTAAGTGTTTTCGGATTTGTGAAAAGATTTGGTTGGA
GGTGGAGGGAAGCTGTTAAAAGAAAGTTAATACTCTTAAAAAAAA |
Primers for UN27728 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCCCTTCTCATTCAAACAGGA |
59.656 |
21 |
GCATGCAACTGCTCAACTGT |
60.064 |
20 |
239 |
7 |
245 |
2 |
TCCCTTCTCATTCAAACAGGA |
59.656 |
21 |
TTCTCCGGTAGCGAGAAGTG |
60.529 |
20 |
120 |
7 |
126 |
3 |
GCTTTCTCCCTTCTCATTCAAA |
59.835 |
22 |
GCATGCAACTGCTCAACTGT |
60.064 |
20 |
245 |
1 |
245 |
|
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