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Simple sequence repeat (SSR)
>UN27747
CATTTTCTCGCACTTTCTTTCCTTCACTGTGTGATGGCGGCGCAGGTAGAGATCGAGGACCAAGCATCCATCACCGAACTCGATAACGGCGAAA
TTCTCGATCCCCTCTCCTCCTCCTCCTCCGACTCAACGATTCTTCTCGGCGAAGGAAACCAAGAACACCACGTCATCACGAAATGTTTCCTCTC
CGGCTTCAACGCCACTCTCGCTAACCCAACCACCACGATCGTCGCTATACGTAAGAAATCAACGAACACGATCACCACGAGAGCCAAGTCTCTA
GCCTTCCGCATCTTCACAGAAGCCATGGCGAGGAAGAACGGCGGAGATCCCAACGTGAAATACGCCTGGTACGCTGGCTGCTCTCGAGAACAGC
TCGAACGCGTCATCTCCTACGGATTCAGCAGCCGCGAGATCGATGATGATGATGATTCGTCTCATGGAATCGGAATCCATCTCGTTCCTTCTAA
CTTCTCCCTCTTCGCAGCGGAAGGTACGGAGGAAGACGAAGAAGGTTTAAGGCATCTTCTCTTGTGCCGTTTGATTCTTGGGAAGCCTGAGGAG
ATCATCCCCGGGTCCAAACAGTCTTACCCTAGCTCTGTTGAATTCGATTCCGGTGTGGATGACGTTCAGAATCCTAGAAAGTATATCGTATGGA
GCTCTACCATGAACTCCTACATCATGCCTACTTATATCCTCACTTTCAGGTCTCCTCGTCTCACAGTTGTAAGCAGAGGTGGTTCTCCGGCTAC
ACCAAGCTCTCCGCGGGTTAGTTTTGCTGCTCTGGTGTCGACGCTGTCCAAGTCGATGGATACTTTGAGAATGAACTTGATCATGAGCACTTAC
GATGATTTTAGGAAACGGAAGATTCAGAGAGATCAATTGGTTAGGAAGGTGAGAGAAGTGGCTGGAGACAACCTTTTGGCTCAGATTATCAAGA
ACCACGGAGACAAAAACAGGGTCAGGGTTTAAACAGGCAGGGTAGGAGAAAGGTTCTCACGTGTGACGCGTAATATGATGGGGTAGAAGATCAC
ACACGTTATATACAGGCATAGACAGACTCAATTAGTTGTGGAAACTATATCAAGAGTTTTAAAGCTTTTTGTTTTCTTCTTTCTGTTAGCTTTA
CAAACAGAGGATCATCCCTTTATGATATGAAAACGTAGAAATTCAATTCA |
Primers for UN27747 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTAGCCTTCCGCATCTTCAC |
59.978 |
20 |
CAGGCTTCCCAAGAATCAAA |
60.184 |
20 |
280 |
280 |
559 |
2 |
GCGTCATCTCCTACGGATTC |
59.658 |
20 |
ACCGGAATCGAATTCAACAG |
59.933 |
20 |
236 |
383 |
618 |
3 |
GATCCCAACGTGAAATACGC |
60.339 |
20 |
CAGGCTTCCCAAGAATCAAA |
60.184 |
20 |
232 |
328 |
559 |
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