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Simple sequence repeat (SSR)
>UN27748
ACCTTCTTCTTGTTCTTCTCCTTCTCAAGCTCAAGAAAGATAAAAAATAAAACTCTGCGCAAAATTCAAGGAGAAAGAAGAAAACAGAGAAAAA
CTTTCTTCTTTTTGACCTTTTCTTCTCCTCTCCAAAGACTAAAGTTTCTGTAATGGAGTCTCCACAATCTGTGGCCTCAACCTTCAATGGAATC
CACTTGAACGGCAGTGATGAAAACATCATAACAAAGAAAGCTGTCATCTCCTCTGATTCAGACAGCTTCATCGGTGTGCTAGAGGTTTTTGTTC
ACCAAGCCAGGGACATCCACAACATCTGCATCTATCACAAACAAGATGTGTATGCCAAGCTCTCTCTCACGAGCCATCCCGAGAGCTCCTTGTC
CACGAAGATCATCAACGGCGGAGGGAGAAACCCTGTCTTCGACGACACTCTTCAGTTCGATGTGAAGAGTGTTGATTGTTCGCTGAAATGTGAG
ATATACATGATGAGCCGCGTGAGGAACTATCTCGAGGACCAGTTGCTTGGTTTCGCTCTTGTCCCTTTGTCTGAAGTGATTGTGAGGAACGGGA
AGCTGGAGAAAGAGTTCTCTCTTTCTTCGACCGATTTGTTTCACTCTCCTGCAGGTTTTGTTGAGTTGTCTCTCTCCTACGCTGGAGAGTTCCC
TGAGGTGATGCACATCCCTGCGGTGGTCCCAACGGTGGATGAGGCAGAGTTGGGTTCTATAGAGGTTGATGAGTCTGAGTTCATGGATCCGAAG
ATTGTCTGTGAGAACAATCAAATGGTGTCTAGTTACTTGGCCACTCCTTGTACTGATTCTGATGAGTTTGTGAGCTCTGAAACCGCCTTTGTGG
AAGTAAACAGTGCTCAGACTGCAGTTGTTGAAGAAGCAGCAGCCCCAACAAGTACTGACATCACAAACGGAATCTCTTCTCCATCCATTGCAGT
TAGCTCCGGTTCCTCGGGCACTCATGATGATTTAGTACTATCAAGCAAAGGCAACAACAACAACAACTCAGGTTCAGACAAAGAAGTGAAGAAG
AAGCTACCAAGCGAAGAAAACAACTCAGGATCAGACCAAGGAGAGAAGAGTCCAGCAGATATTATCAAGAATGGGGATGGTGAAGAGGTTGTGA
AACCGATTCTGACGGTGAACATTGAACAACCAGAGCAGAAGGTAGTGCAGCAAGATATTGTTGACATGTACACGAAAAGCTTGCAGCAGTTCAC
TGAATCACTGGCGAAGATGAAACTGCCTTTGGACATGGATAGCCCAACACAATCAGAGAACTCAAGCTCCTCCCAGCAGACCCCAAAGAGCGCC
AACTCCCGTGTTTTTTATGGCAGCAGATCCTTCTTTTGAAGAAGAAGAAGCTTTCAAGGCATCAGGAGTAGCAGCAGCAACTAATGAAAGAAAG
TGTAATAATAAGTTGAAAGTAGACTTACATAAAAAAAATGTGTAACTATTGCCTTCAGCTTCTCTTGTTATCTGCAACTTTTTTCTAATTTAGT
ACTAAAATCTTG |
Primers for UN27748 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGAATCTCTTCTCCATCCA |
60.15 |
20 |
TCACCATCCCCATTCTTGAT |
60.135 |
20 |
204 |
914 |
1117 |
2 |
ATCCATTGCAGTTAGCTCCG |
60.235 |
20 |
TCACCATCCCCATTCTTGAT |
60.135 |
20 |
189 |
929 |
1117 |
3 |
CATTGCAGTTAGCTCCGGTT |
60.27 |
20 |
TCACCATCCCCATTCTTGAT |
60.135 |
20 |
186 |
932 |
1117 |
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