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Simple sequence repeat (SSR)
>UN02878
CTAAACAATTAGGGATAATAGCTAAATTTTATTAGATCAGAGTGTATACAATATTTCTACTACTTTCAAATTATATTTTGGTACTTGAAAAAGA
TAGTACCATTTAGCTTAGATTTCAGAGTAATTTTCCTTCTCGTCCTCTTTTGTACTCCTAACGACTCTCCCGTTTGTAACATTATCATTCTCTA
CTCCGAACGGCACACCCAAAACCACCCGAGAAACTAAATTGTCTGTCAAAAGGACAAATGATTTATTTGTTCATGGTTTGTGTCACGTCCTCAT
CCGTCCTCTGGAATATATCACTGGAAAACTTGCTCATATATACCTGCATGTCCATCTAGCTTTTCATCCCTTATGCTGTACTCAAAAACGATAG
TTAGAAACAGTATAAAGTAAAGCAAAGCAAAGCAAAATCTCGAGCTAAAAGAGGAACATGTTTCTTCACTTCAGCTTTCAGCTTGTCCCCGTCT
TTTCCCAGCCTAGAAGATGGATATACTGGCCTCTACTAAACCGTCGTGACCAGAGAGCATATGTGCATATCTCCCAACAGCACACCATGATTTT
GGAGATAGACGGTTATCTGAAATCAGCTTGCCTATCATCATCATCATCATCGTCGTCTCAACGACGACAGTTTAGTTGGGTTCTTGGTCGTGAT
AACGTTAAACGCAGTGCACCATTCTCGTCTCAACGAATCTTGAACCTTG |
Primers for UN02878 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGTCGTGACCAGAGAGCATA |
60.008 |
20 |
TCGTTGAGACGAGAATGGTG |
59.831 |
20 |
183 |
512 |
694 |
2 |
CGTCGTGACCAGAGAGCATA |
60.008 |
20 |
ATCACGACCAAGAACCCAAC |
59.827 |
20 |
147 |
512 |
658 |
3 |
TATCTCCCAACAGCACACCA |
60.112 |
20 |
ATCACGACCAAGAACCCAAC |
59.827 |
20 |
121 |
538 |
658 |
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