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Simple sequence repeat (SSR)
>UN27857
AAATTAAAAAAAAGAAAAACAATTCTCTAGAGTTTTCTTCGTTTCTCTTTTGATTTAAATTTTCTTTCTTATTGTATGGGCTTGATCGGAGAAA
AGCCACTTTTGTGTTTTTGATTTTCATTATTGTGTTTTATTTAAATTTTTGGCTGGAGGGTGTGTCTGAATAATTCAATGCTTCTCTCTTCTCT
TCCTTTCTAAATCTCTCTCTCTCCTCTCTAAACCAAAGCAGCTATGGGCGACGAACACTCTCTCAGCCCAAAGGATAGTTTCGTCTTCAAGCTC
CCTAAAAAATCCCCACTTGTGTTGAGACTGGTCGTTCTCATGTTTGTCATGGTCTGCGCTGTCTACATTTGCTCAATCTGTCTTAAACAAATCG
GTGTCGTCCCAAGTGCTGGTTTTTTGAACGTTGAAGTCTTTGAGAAGCCTTGTCCCGAGCCTAACATTGAACCATGGGACATACCATATGTACA
TTACCCTAAACCCAAGACATACAACAGGGAGGAATGTTCGTGCAATCCAGTTAGGTATTTTGCGATTCTGTCAATGCAGAGATCTGGTAGCGGC
TGGTTTGAGACTTTGCTAAACAATCATACTAACATAAGCTCCAACGGGGAGATCTTCTCGGTTAAAGACAGGAGGGCTAATGTCTCCACCATTT
TCGAGACCTTGGACAAAGTATATAATCTAGATTGGTTGAGTAGTGCTTCTAAGAACGAGTGCACTTCTGCCGTTGGTTTGAAGTGGATGCTTAA
TCAGGGTCTAATGAAACACCATGAAGAGATAGTAGAATACTTCAAAACCAGAGGCGTCTCAGCTATATTCCTCTTTAGAGAAACCTCTTGCGCC
GAATGATTTCAGTTCTTGCAAACTCTTACGATAAAGATGCTAAGCTATTAAACGGTACTCACAAATCCCACGTTCATTCTCCTAAAGAGGCTGA
GATATTGGCGCGCTACAAACCGTTAATCAACACAACTCTTTTGATAGCTGGTCTGAAGCAAGTTCAAGAGATGACTACAAAAGCACTTTCTTAC
TTCAATGCCACTCGCCACATCTTCCTCTATTACGAAGACGTTGTCAAGAACCGCACCAGACTAGATGATGTGCAAGAGTTTTTGAAGGTTCCAA
AACTTAATTTAAAGAGCCGGCAAGTGAAGATTCATCACGGTCCTTTGTCACAGCACGTACAGAATTGGGAAGATGTTCAAAAGACATTGAACGG
GACTGGTTTTGAAAACTTTCTACTTGAAGATTACCGAAAGTGAATTAAACACAGTAGGAGAGAGTGATGTACATAAACCTCTCTCGGATAATTG
TCAGACCATCAACTTGTAGTAGAGTTTTGCTAGTGCCACGAACAGGTTTTGCAAATCTGTTTTTTTTCTTTTATGTTTTAGTTTTCTCTTGTAA
GCGAGTTGATAGATTTTTATTTGATTC |
Primers for UN27857 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTATGGGCTTGATCGGAGAA |
60.036 |
20 |
GGGCTGAGAGAGTGTTCGTC |
59.993 |
20 |
184 |
74 |
257 |
| 2 |
GTATGGGCTTGATCGGAGAA |
60.036 |
20 |
TAGACAGCGCAGACCATGAC |
60.016 |
20 |
274 |
74 |
347 |
| 3 |
GTATGGGCTTGATCGGAGAA |
60.036 |
20 |
GTAGACAGCGCAGACCATGA |
60.016 |
20 |
275 |
74 |
348 |
|
|
