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Simple sequence repeat (SSR)
>UN02888
GGCAGCGTAAATAATAAAGGATGTAGAACAACATGAATCAGTTGATTTTCGCAAGATCAGTAAGCTTATGCCTTCTTTTCATAGTGATTTTACT
GATCAAGTCCACACGGAAGAAAGACCATACATTTACACTACAGCACAAGACAAGCTTCTAAAGCCAAACCACAAGTCCTTCACTACTTCTTACC
TTCTTCAACAGCACCCACCGCAACACTCATCCTTTTCACATGACATTCCTCTGGTACCACCGCCATTGACCGCCTCAGACCACATATTGTCCAC
AGATACAAAGCCAGTAGCACCCCTAACGCTCCACATACCGCACCCAAGACCAAAACACCAAGCATCCGCCATATGCACTCACTTCTCTCAACAC
CTTCTTCCTCCTCCGTGGAAACGTCAGCCTCCAAAGCTTGATTCGGTTCAAGCGGCAGTGAAGTCGTCCACACCTGCGTTGGCTGCCTTGTTTC
AAAGTTCCATGAATGGAGAAAATGTGCCTTTGAAGAGTTCCCGTTTGCAGAGCTTAAACCCACCACGAACTCACCATTACTCTACAGCTCCCCC
AAGTCCACCGAGAAAGAGAAGAACGGATCCAACAACTTTATCGAACCTGACTTTCTGAACCGAACCATCGTTCTCTTGGAAAGTGCTTCATACT
CCACCATACACCTCAACGTCCCTCCATTGTCCGTCATCACCAAGTCACCCTCAAAAGAAAGGTTTCTAATCTCGGAAGATTCAGGTCTACCTAT
CAAGATCCTTGCACAGTTTCCTCTGTTGGATATATCAAACTCAAAACCTACAACCGTCTCTTTCTTTGCGTACTGAAACAGAAACTCTAAAGCA
GAGGAACTGTTACCTTTCTTGCCGAAGAGACTAGGATCCAAACTAGTTGGAACCATTACAAAAGCCATGACGTCACCAACCTCATTAGGCATCG
AGAACGAGAAGTAACTCGAGAAAGATAACAAGTTCCTCTCTTTACCTTGTAAAAGCTTGATGGGTTTCCTGTAAACGACTCGTCCCACGCTTCC
AATCACTGAGTCAGTCAGCTGAATCGGAGAACCGTCACTGACCAGCTTCGAATCTCCGAACAAAGCAACCTTCCTGTAAAAACTCGGAGACTTT
GCGAACCCATCAAACCAAAACGAGGAGTTCCCATCTGTTGTAGCCATGGTTCCATGAATCTTGAAGCACAACATAACGAACAAAAAGGACAAGG
CTTTGAACATCGACATAGCTTTAAGTAAATGGAAATTTGGTCTCTTCTCTGATTAAAATGGGTAAAGTGGGAAGCTCTTCTTCTTCTTCTTTCT
ATATGGAATCTTCAGGTTTCGAGAAAGCATTCCACTTTCCCTCTGTCTCTATCTTGTAGTGCTTGCTCC |
Primers for UN02888 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTTTGCGAACCCATCAAAC |
59.978 |
20 |
CAGAGGGAAAGTGGAATGCT |
59.284 |
20 |
238 |
1124 |
1361 |
2 |
CTCCGAACAAAGCAACCTTC |
59.853 |
20 |
CAGAGGGAAAGTGGAATGCT |
59.284 |
20 |
274 |
1088 |
1361 |
3 |
TCTCCGAACAAAGCAACCTT |
59.853 |
20 |
CAGAGGGAAAGTGGAATGCT |
59.284 |
20 |
275 |
1087 |
1361 |
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