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Simple sequence repeat (SSR)
>UN27987
CAACAGAATCCAACTTCCCAATATCATGCTGCTTTCATTTCTACAATCAGAACACAACAACAACAACAACAAAAAAAAGAGAGAGATTCCACAT
GGAACAGCAAACACATCATTATCAGTAGTAAAAAACAATGCGACTTTAAATTTCTAAGTGCAGCCTTCTTGTAGACATGAACAAGTTTAAGAAT
TGGTGAGAGGCCTAATGTGATGTTGGTGTTAACCATATAGACGCATGAGTATACTCCCTTAGTCTGAGCAAAAGCAAATCTCAGCTCCGTTGCC
ACCAATTGAAGCAGTGAAGCACTGAAAACCACTGGACTCTAGCTCTTGCACCACTTTCTCCACCGCCGTCCCTGAAACCAGTGTAGGTAACAGA
GTGAGGACGCATCCGCCACCACCAGCTCCAGTCAGTTTTGAGGCAAGTTTGTGCTTGAGAGTGGTTTGCATCACGGTATCAATCGAGCTGTGGC
TAACCCCCATTGACTCCAGCAAGCCTTGGTTCATCTCCATGAGCTCTTTTATCCCCTCTTCTTTCTCTGTCACCGAGATCTCGTCTTTGCTTTG
GATAATTGCAGCCACCTCTTTGCTTATAGAGTCCACCGCATTGAACACCGAGTTCATCGCCTCTGGATGTCTGACCGTTCTCTCTGACACACCA
GAGACCAGAGCTTTCGTGTTCCGTCCAACTTTAGTGTTGGTGATCAACATTCTCAGAGGCATGTTTGACTTTAACCGAGTTATCTCCCCTGAGC
AGAACTTGATCATGTTCCC |
Primers for UN27987 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAACAGAATCCAACTTCCCAA |
59.956 |
21 |
CGGAGCTGAGATTTGCTTTT |
59.592 |
20 |
277 |
1 |
277 |
2 |
TCCCAATATCATGCTGCTTTC |
60.052 |
21 |
CGGAGCTGAGATTTGCTTTT |
59.592 |
20 |
262 |
16 |
277 |
3 |
CAACAGAATCCAACTTCCCAA |
59.956 |
21 |
CAACGGAGCTGAGATTTGCT |
60.538 |
20 |
280 |
1 |
280 |
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