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Simple sequence repeat (SSR)
>UN27990
GGCTTAAGAAACATTGATGAATTCGATTTGAAGCAAAATGTCATTGTGTTAACAAAGTCAATTGCAACATTTAAAGAAACTAAACCGAGGCTAA
GATCCAAAACGTGACATGAGAAGAAAGGGCAATCTGAACCCGAGTAACGAAAGAAAGCGCCACAGCGACTTCATACCTAAGACATGAAAGCTGG
GTGTGTACATCACAATACTTGAGATCTTTGGCGTATAAGACCACAACTCCTGCCGATGAACACGCAGCTGCAAGAGATAACATTGCAGTCACCC
AATCACCAACGACGAATAAGCTGACCAAGATTGGGTTTTGGAGATCTTTCTTGGTCCTCAGAGCATAAACATCAAGACACGCGAGGGCAAAGCT
CCACAGCAATTGAAGACCCATCGAAGCAATCAAGTAGCAGAAAGCAGTGCGACCAGAGAAGTCGGTGGCAGAGACCATAAAGCCGATGGAAGCA
GCAGAAGAAGCACATTGTCCGATTCTCAGTAGCAGACCACACACAGTTCCTGGACCTACGAAGATCTTCTTCATCTCCCCCAAAATGTTACAAA
ATTGCAATAAAATCAAGCGAGAAAAGAGGAACAAAAAAAAACCCTAGTTTTCGCGAATTAAAAGATACATTTTGGCGGGGAAGAAGAAGAGATG
CAGAGGAGCTTCATAGCTAAATAAGAACCCTAGAAGAAGAAGAAGATGATTGACACCACCACCTACTACATAAGAGTTTCCTAAATTGCGATAG
ATTCCTTATTATAAAGGCTTCTTCGAGTGGACTCCCC |
Primers for UN27990 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTTCATCTCCCCCAAAATG |
59.864 |
20 |
GGGGAGTCCACTCGAAGAAG |
61.16 |
20 |
252 |
538 |
789 |
2 |
TCTTCATCTCCCCCAAAATG |
59.864 |
20 |
GGGGAGTCCACTCGAAGAA |
60.183 |
19 |
252 |
538 |
789 |
3 |
TCTTCATCTCCCCCAAAATG |
59.864 |
20 |
GGAGTCCACTCGAAGAAGCC |
61.311 |
20 |
250 |
538 |
787 |
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