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Simple sequence repeat (SSR)
>UN28031
GGCAGAGAAAGGTGTGGTAGTGGGAAGGCTCATATTCAGTGACAACGGAGACATGATAGACTGCACAAAGATGGGAATGGGTGGGAAAGCTATT
CCACCTAACATCGACAGGGTTGGAGATATGCAGAGTGATGCTATGTTCATACTCTTAGTTGAGAAAGATGCAGCTTACATAAGGTTAGCTGAAG
ACAGATTCTACAACCGTTTCCCCTGCATCATCGTCACTGCAAAAGGCCAGCCCGATGTGGCCACGAGGCTGTTCTTGAGGAAGATGAAAATGGA
GCTTAAGCTTCCGGTGCTTGCCTTGGTGGATAGTGATCCTTACGGGTTGAAGATCTTGTCTGTTTATGGGTGCGGCTCGAAGAACATGTCTTAC
TATAGTGCAAACTTGACTACACCTGATATTAAGTGGCTTGGGATCAGACCAAGTGATTTGGACAAGTACAAGATACCTGAGCAGTGTAGGTTGC
CAATGACTGAGCAGGATATCAAGACCGGGAAGGATATGCTAGAGGAGGATTTCGTGAAGAAGAATCCTGGGTGGGTCGAAGAACTTAACCTGAT
GGTGAAAACAAAGCAGAAGGCTGAGATTCAGGCGTTGAGTTCTTTTGGTTTCCAGTATTTATCAGAAGTTTACTTGCCCTTGAAACTGCAGCAG
CAGGATTGGCTCTGATCTTCTGGTTGCTGTGTTACTGAGTTACTGTTCAATTAGAGACCAACAAGTTTACTGATGGGAGTTATTGCAATTTAAA
TTGTGTTGTATTGGTTTACACAGAACTGGGAAACTATTTGTAAGCTGCTTTATTCTGAATGTACACAGATATTTGCATCGAGATATTGCAATCT
TTACTCATTATTTTCTGCAATTTAGTTTGAAATTTGCATAAAATACAAAGATGATTAGTTATATGTACCAGTCAGGATCAACTACTTTTTGCGC
TGCAACCACTTATGCAAAGACGCCTTTGTCACCATCAACCTCTCTAGAATTGCAGGCCTCCTCGTTGAAAATATACCAACAATCCACTTGGTGT
TCTTTGAAGTATGTTCTGTATTTTGGTCTGCATCATCCACATGCTGGGCATCCTGTGTTATATCTAGCACAGGTCTTTGTCTAGCAGGAAGAAC
CACAAGAGACAATTCATCTTTTAGGAGCTTTACTAGCACATCTTTCACATCAATCTCTTGCTTCCCTGAATCGGTATTTGCTTCACAGGTTCCT
AGGATGATCACCAAATCATCTTTCACAACATCACCTCGCGTATAGTCTTCCTTGATCATTCGCAAAACTGCTAGAACAACAAGTCTAGCCTCAA
CCTTGGTAAGTCCTTGAAGGTCAATTGCAAGGTGTCCGGATGTTCTCTCTTGCAAGTGTCTAGCTACTTTTTCAATGAGTAGACTTACAGGTCT
CCCAGAGTCAGTACCTTCCTGGTCGCTTGCTTTGTTTATGCTTTGGCTGTGCTCCGGTGCGGTGGCGTAGCAGCGACGGTGATGGTGGTGGTGA
GGATTGGTTATGACGGAGGAGGAGGAGCCGAAGACGATGACAAGGTCTCTCATTCCTCGCCAACGGTTGAGATCATCATCATCATCAATCACTG
GTGGCTCACTCTCTCTGCTTTTTATTTTATTTTTATTTTCC |
Primers for UN28031 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGTTATGACGGAGGAGGAG |
60.065 |
20 |
AGCAGAGAGAGTGAGCCACC |
59.738 |
20 |
109 |
1509 |
1617 |
2 |
TGTTTATGCTTTGGCTGTGC |
59.879 |
20 |
AGCAGAGAGAGTGAGCCACC |
59.738 |
20 |
175 |
1443 |
1617 |
3 |
GGATTGGTTATGACGGAGGA |
59.75 |
20 |
AGCAGAGAGAGTGAGCCACC |
59.738 |
20 |
113 |
1505 |
1617 |
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