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Simple sequence repeat (SSR)
>UN28374
GCGAAAAAAATCGACGCGGTGGTCTTTCGTCGGAGAAGGAGAAGAAGAAGATGAAGCAGAGGACATGGCCATGCCCATCCGAAGGATCTCGATT
CACCTCCCTTCCCTTTTCAAAACTCCACGAGAAACGAAGCAGATTCTCCTCCTCCTCCTCCATCAAAGCAACGGCGTCAAAGTCAACCTCCCCG
CCTCCACCATCGCACGACGACACCGCCGGAGACTTCTCGGCCCTCCCCTTCGACATACTGACGAAAATCGCGGCGCCGCTGAGCCTGCCGAACC
TCCAGGCGGCGTCGTCGGTGTGCAGGTCGTGGAGGGAGGCGCTCCTCCCGCTGAGGGAGTCGATGCTGCTCCTCCGGTGGGGGAAACGGTTCAA
GCACGGGCGTGGAGGCGTCAAGGCGAATCTGGACAAGGCGCTTGACTCGTTTCTGAAAGGAGCCGCGCGTGGATCCACGCTCGCGATGGTCGAC
GCGGGGCTCGTGTACTGGGAGAAAGGGGAGAAGGAGAGAGCGGTGGGGTTGTACCGGAGGGCGGCGGAGCTTGGTGATGCCGTTGGTCAGTGTA
ATTTGGGGATCTCTTATCTCCAAGCTCAACCCTCAGATCCTAAGGAAGCGATGAAGTGGTTGAAACAATCTGCAGAAAATGGTTATGTTAGAGC
ACAGTATCAGATAGCTCTTTGTCTACACCAAGGCCGTGTCGTGCAGACCAATCTGCTAGAAGCTACTAAATGGTACCTAAAGGCAGCAGAAGGT
GGGTATGTACGAGCTATGTACAACGTTTCGCTTTGTTACTCGGTTGGGGAAGGGTTACCACAAAACCGTAAGCTAGCAAGAAGGTGGATGAAAC
GCGCAGCTGATCACGGCCATAGTAAAGCTCAGTTTGAGCACGGCCTTGCCCTATTCTCTGAAGGAGCGCTGTTGAAAGCTGTGATGTAC |
Primers for UN28374 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGTCGGAGAAGGAGAAGAA |
60.065 |
20 |
TCAGTATGTCGAAGGGGAGG |
60.065 |
20 |
223 |
27 |
249 |
2 |
TTCGTCGGAGAAGGAGAAGA |
60.065 |
20 |
TCAGTATGTCGAAGGGGAGG |
60.065 |
20 |
224 |
26 |
249 |
3 |
CCCTTTTCAAAACTCCACGA |
60.081 |
20 |
TCAGTATGTCGAAGGGGAGG |
60.065 |
20 |
145 |
105 |
249 |
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