Simple sequence repeat (SSR)
>UN28410
TGCAATATAAAATATTTGTTTGATTTTATATTATCATTCTATATATTACTAAAGAACTATCACAAATTAGAAATAAATCCTAATATAACTTAGG
ATTCGATCCGTTGGAGTGAAAAAGAGAAGGATTCTAACAACCCCAAATAATTAAGAAAAAACCCATTTCCATGTATAATCACAGACCGGAAGGA
TACACAAACCATGGAAAGCTTTGTTTTTTTGTTTGTTTGCTCACATAATATTGCAGCTTGATGTGTTCTCATCATTGAAATAATGAGAATACTG
ATCACCACCATGGGGAGGATAAGGGTATGGATACGGGTACGGGTAAGGATGTTGTTGGTGCGGTTGAGGTGGCAAATAGTTGACATCAGGAGGT
GGTCGAGCGTACATCATCGGTTGAAACCGCTCGTTGCCCATGGCTCGTTGCTGGTTCATAACCGCTGCTAAGTATTGTTGTTGTTGTTGCTACT
GCTGCTGTTGCAAGTAGGGATTTCCCGGCATTGAGTCTTGGCCGCCTCCGGCGCCACCATGGCCTTGGAAATATCCTGGAGGGGCTCCAC |
Primers for UN28410 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGTTGAGGTGGCAAATAGT |
59.993 |
20 |
AAGACTCAATGCCGGGAAAT |
60.826 |
20 |
167 |
343 |
509 |
| 2 |
GGGGAGGATAAGGGTATGGA |
59.974 |
20 |
AAGACTCAATGCCGGGAAAT |
60.826 |
20 |
216 |
294 |
509 |
| 3 |
GGGGAGGATAAGGGTATGGA |
59.974 |
20 |
CCCCTCCAGGATATTTCCAA |
61.004 |
20 |
261 |
294 |
554 |
|
|
