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Simple sequence repeat (SSR)
>UN28545
GCACCAGCACCAGCACCATCGTATAGACCCCAACAGGTGCCTAGTTATCGTGCGCAGCAGGCGAGTGTTAATATGAGGAATGTGTTCAACGGGG
TGAGACCAGAGAATAGGCGTCATCCTCCTCAGCAACCAACGGCTTTTAGTCAACGGTGGTCAACGTTTGGACGTCTTGTCCGTTCTGCGGGCAG
GTATGAGTATGGAAGGGAGCATATCAATAGAGAAGTTGCTTGCCACCAGTCTTGCAAGAAACAGTTCATTGCTTTTGAAGTCGCTTTTGTACCA
CCGGCGAATGGATCGTATAATCATCAGACTACTTCTTCTTTCATGTTTCCAGGCCAAAGGGCTTCTTGTCCTGAGCCTCACAAGCGTCCAGATG
ATACTGTTCCCTTTGGAAAAGCGACGGCTTCTTCTACTGCTGGAAACAATAAGGGAAAGAGGAAGAGAAAGGATATGGATGAAGTTAGTGAAAG
CTCTGACAGTGAAAGTAGTAGCGAATCAGAAGATGATGATGATGATACTATGGCAGGAGGGGATATGGGGTCCAGTAGAGGAGGGCAGGAGCGT
CGGAGGTCAGTACGTAGCAAGCGTCAGTCTCTTACAATGAGAGTTTGAGCGATGACAATGATGTTGACTTAGCCAACGACATTGTTGAAGGGTC
TGGGAAAATCTAGATACTGAAAAGAAGAGAGGATCATCATGACCAGTCTACTGAAACCTTAAACCCAAAGAGAGATACAGAGACAGC |
Primers for UN28545 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGACGGCTTCTTCTACTGCT |
59.78 |
20 |
CCTCCTCTACTGGACCCCAT |
60.328 |
20 |
157 |
398 |
554 |
| 2 |
AGCGACGGCTTCTTCTACTG |
59.78 |
20 |
CCTCCTCTACTGGACCCCAT |
60.328 |
20 |
159 |
396 |
554 |
| 3 |
CGGCGAATGGATCGTATAAT |
59.779 |
20 |
CCTCCTCTACTGGACCCCAT |
60.328 |
20 |
271 |
284 |
554 |
|
|
