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Simple sequence repeat (SSR)
>UN28576
GGCTATGAATGAGGCTATTGACTTTATTATCACCATGTTCGTAATGCAATGCCAAACAGATCGACACAATCTTGTAATGAGAGCTCTAAAGTTA
GCATAGCACAACGATCTAATGCAAAATGTTACAACGGATAGTTAAGAGGGATAGCGTATGGAATGATGTAGCCGATCTCATTGGACTTGGGACA
TAAATTGTAACTTAAGGGTTGTCACATTCCATGACTTCATTGATTTGGACATTAAAAGACTCGGGAATGGTGGGTTGTATCTCCATCCTGTGAG
CCTCGCTTGTGGATTCGCCTTTGTTCCTCGTATCTGACAACCATACTTCCAGTGTGGAGTGTACTAAATCGTCGAATATCCCTTTCTTGAATTT
GCTACCCATTTGTGTAACAAGAGCATAAAGTGGCAATGTGCTGTAACTGCAAAGCACTTGGACTAACACTCCCATGACAAGTCGTGGAATAAGG
AAGCCTAGTTTCTCCATGATACACGAATGTATTCCATATGTGAACAAAATCCAGAAGAAGAAAGCGATCTCAAATGCATTCTGAAAGAGAATGA
AGTGGACAAGTTGGAGAACAATGTCTGGCCTGTGGAACCAAAAGAGTTCATCAGAAGGTGTGATGACTGCTTGTTCCCCACGGTTTCTCTTCTC
GCAAACATCCACAGCTAAGCTACTTATTATATTCTACAATTTGGCACCCACCATTAGTAACAATATTAAAGGCAAGAAAGACAACCAGAAGTAA
GTATTCCATCCTCCTACATTCAGCAGTAGAAAGACGACGACAAAGAGCCAGAGATACCAGCTTATGGTCACAACTTTCTTGAAATCTATCTCCA
CTGTTCTTAGCATGTACTTGTGAAAATTAAATGATGGGTTTGTAGGGCAATGAGTCATGATGAACCCATGTCGCAGAGCTATATATTCTGATTT
GGTGACAGAACCATAGAACTGCTTGCAGAATGATCTCAGCCAGCTGATGACAACAGATCTTCTCCAAAATCCTCCAGCATGCATCTTGAAGAAC
TCATGATTTGCGGTAAACAACTCGTGAAGTGCATGAGCATGAGCATGAGCATGAGCATGAGCATGATGAGCGTGAGCATGGCCAGGCTTTGAAG
CATCCTTTTGAGAAGGAGGTTTCTTGAACTTATCCTCCCAACGCTTCCATTGTTGTATCCTAGCTCCTCCAAGAACCATGGTTGAGGCACAGAA
GATGACGTGAAAAACCGCTAGCACGAAGATAAAGATATGGAGATGATGTAACGCTTCAACGGATATTAACGGAACCTTCCCCTTGGCAGTACAA
TGGTCTGGGCTTGCTCCTGTTGAAAGTAGATGTCGTGTAGTGAAGATAAGCGAATGAGATGATTCTGGAGCATGATGCGTCTCCTCCTCCAATG
GCTTCTTACAAGGGAACATGTTGCTAACAAGAGCTGGTGGGACACATATATGCCTGATTGCTGTCTGAGACACCGTTAGCATCAACGAGATGAA
TCCTAGTAGCATCAGTTCTTCTTTAAGTTTCTGCAAGGCCTCAAACAAGGCATCTTGTTTTCTACGCTTCAGATACTTTCCGAGATGATGAAGA
CCC |
Primers for UN28576 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCAGAATGATCTCAGCCAG |
60.096 |
20 |
CGTCATCTTCTGTGCCTCAA |
59.984 |
20 |
266 |
964 |
1229 |
2 |
TGCAGAATGATCTCAGCCAG |
60.096 |
20 |
GCGTTGGGAGGATAAGTTCA |
60.074 |
20 |
209 |
964 |
1172 |
3 |
TGCAGAATGATCTCAGCCAG |
60.096 |
20 |
GCGGTTTTTCACGTCATCTT |
60.118 |
20 |
277 |
964 |
1240 |
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