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Simple sequence repeat (SSR)
>UN00019
GGATCCCTCAGAACCATTTCGAAATCATTTTAGTTTGAGAGAGAGAATACAGACGACACCAAGTTTCTTTCGACCTCTTCGCCGCAGATCAAAT
TCTCCTATTCCTCGGATAAACCTCTCCTTCTGCGGCGGCGATAAAAAAGAACAAACCTCCCAAACAACAACAAAAGTTTCAACCTTTTATTGTC
TGTTCCGTCTCTCTCTCTCTCTCTCTCTTTCAAGAAACCAAATATTTCGATAAACATGGCTCGTTCTCTCTCTAACGTTAAGATGGTACCTGCT
TTCGTCTCTCAAGAACTCTCTAATGCAATCTTCCGACGCGGTTATACGGCCACAGCGGGTAAGTCTAGCGGTGGAAAAGGTGGAGCCGTTGTTT
CGGCGGTAGTGAAGAAAGGAGTGGAAGGATCGAACCAGAAGATTGCTTGGATTCCAGACCCCAAAACCGGTTATTACAGACCGGAAACCGGTTC
CAACGAGATTGACCCAGGGGGGTTACGAGCAGCTCTCTTAAACAACAAGCAGTGATTTGATTAATTCAGAAAAACTCTGATTTATTTGGATTAG
TTATATTAATGTTAATTAAATGTCTTAAGATTAGGGGAAGAGGGTAATTATCCGTTGTGGTGAACCCTATTTTCATCTGCTATGTGCGAT |
Primers for UN00019 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAACAAACCTCCCAAACAACA |
59.861 |
21 |
TTCTGGTTCGATCCTTCCAC |
60.05 |
20 |
274 |
143 |
416 |
| 2 |
GAACAAACCTCCCAAACAACA |
59.861 |
21 |
CTAGACTTACCCGCTGTGGC |
59.898 |
20 |
208 |
143 |
350 |
| 3 |
GAACAAACCTCCCAAACAACA |
59.861 |
21 |
GCTAGACTTACCCGCTGTGG |
59.898 |
20 |
209 |
143 |
351 |
|
|
