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Simple sequence repeat (SSR)
>UN29551
GGCTCTACAGAAATAAAAAAAAGCAATGAGCTCAATGATGGAAACTCTCCAGATTCGCAAACCTACTTCTCTCCCCGTCTCTCAACGCCTTAGT
AGTCCCACTAAAGATGATCAGCCTGGTGTTATACGCCGTCGTCTCTCTTCTCTCTCACTCAATCTCCTAAACCAACCTTCAGAGATCGCGTCTC
GGTTCCCCAAGTCCAAATCCGTTTCAGATATGGGAAAGCAAGTAGGAAGCTCGGCGAAAGAATGGTGGGAGTGGGGCTGGTCATGGATCCTCTC
GAGGAAACCCATTTTCATCAGAGACCTCGAGCTTAACAGAGAGGAAGCTAAAGCAATTGGTTCTCACAACAAAGGTAGCATAATGCACGTCTTC
TTCAAGCTCCGTTCTCAGATCCGCACCCTCATGGGATCTTCTTCCGACAGTCTTCCTCTTTCATGCAAACAGAAGCGTCAACGATGATGATGAT
GATTCTCTGTTTGTCATTTGTCTCAAAGAATATTATTCGTTTTCATTTTGTTGAATTGGAGGTATAATCAAAATCATATACAAGAGATGTGTTC
ATTTTAAAAAAAATGATGATGTATTTTGTTGCTATAATTAATTTGCCTAGTTTTTTTTAAGACAATATTTCATTAGTTTGGTTTGTTTTACATG
TTGTTTGTGCAGTTGTATTTTTCTATTTAACATGCAAGTATGTAAAATC |
Primers for UN29551 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCATGGGATCTTCTTCCGAC |
60.011 |
20 |
CCAATTCAACAAAATGAAAACG |
59.381 |
22 |
125 |
405 |
529 |
2 |
CAAGCTCCGTTCTCAGATCC |
59.95 |
20 |
CCAATTCAACAAAATGAAAACG |
59.381 |
22 |
151 |
379 |
529 |
3 |
ATCCTCTCGAGGAAACCCAT |
59.896 |
20 |
CCAATTCAACAAAATGAAAACG |
59.381 |
22 |
255 |
275 |
529 |
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