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Simple sequence repeat (SSR)
>UN29617
CCAGAAAAGCAAACTGGCAAGTCAAGATATCATCCTTCAGAAGATATTAGAGCCTCTCTTCCACAAAATACTGGAGATTCCAGGCTTTCCCCTG
CAGAAACTACTAGAACCATCATTGAGTGTGTCGTCATGTTCAGGTGAACAATAAAGGAACCCTGATGCTTACTGGTTCAACTGGTGATGGAGTT
CTTGAGAATATTCTCTGGCCAGACATACCTTATATAACTGATCAGAATGGAAATTTATACTTTCAAGTTAAGGAGGATGAGGACGTCATGCAGT
CTGTTACCTCTGAAAATAACTATGTGCAAGTAATAGTAGGTTTTGATACGATGGAGATGATCAAGGAAATGGAGCTGATGGGTCTATCTGATAG
TGATTTCGAAACTGAAGATGATGAAAGTGGAGGAGAAGATGATAGTGAGGAAGATGGGGATGAAGGAGAAGACGATGAGGAGGAATGGGTTGCT
GTTCTAGAGGATGAAGATGAAGACGAAGATGATGATGATGAGGATGACTATGATGATGATGATGATGAAGATGAAGATGACGACCAATCGCTTG
GTGACTGGGCAAAACTGGAAACAATGAGGAGCTGTCATCCCATGTTTTTTGCAAAGAGAATGTCCGAGGTGGCATCAAATGATCCTGTAGATTG
GATGGATCAGCCGTCTGCTGGCCTTGCCATCCAGGGACTGTTGAGTCATATCTTAGTGGAAGATTATTCAGATATCCAACAGAAACTTGCTGAC
ATAAAACCTACAAGTACCAGGGGAGACAAGAATGCTGAAGAGACTGAGAAGGCAGATGGTGATGATGAATCTGAGAAGCCGAGAAAAGTGGTGG
CGTTTTACAAGCTGGAGATGATAAGAGTTCAACTTATTACAGTGCAAGGGGATCAGACCGAAGTTGAAGTGGAAGATGTGAGAAAAGCACAACC
TGATGTTATTGCTCATGGATCAGCTGGAATCATAAACCGTTTACAAGAAGCTGGTGATAAACTAGCTGAAGCACTTAGATCTTTGTGTTGGAGA
TACTACGGTATTCAAGCAGAGGAAGTGAAGCTGATAGGGTTAGATTCCCTTGGTTTTGACCTCAGGCTTTGCGCAGGAGCAAAGATTGAGTCAT
TGCGGTTTGCATTCTCGACACGGGCAACATCAGAAGATGACGCAGAGGAACAAATAAAAGAACTATTATTCCCGACAAGAGACCCGTCGAAGCC
ACTGGGAAAAAGTCAGAAGGAGTCTTCTTAGTGCTCTCTAGTGATCTTTTAATGAAAGCTACTAGGAGGAAACAGTAATCCAAACTGCAAATGC
ATTGTCTGTGGGACAAACATGAACAAGGGTGGGTTGAAGCATTCAATTGATTTTCGAGGCTGTAATTGTGGTTTCTAGTTTTCTTTTTTTGGGT
TTACTTTGCACAAATTGAGCACTCTAGTTTCAACTCATTCGTTAGCAAAGCTATTGCATCAAAATTGACATAGCTCAAAATAAATCCTTCTTAA
AACTGTCAGGACAAATCTCTAA |
Primers for UN29617 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGAGGAAGATGGGGATGAAG |
60.003 |
20 |
AAACATGGGATGACAGCTCC |
59.934 |
20 |
190 |
422 |
611 |
2 |
TGAGGAAGATGGGGATGAAG |
60.003 |
20 |
ACATGGGATGACAGCTCCTC |
60.08 |
20 |
188 |
422 |
609 |
3 |
TGAGGAAGATGGGGATGAAG |
60.003 |
20 |
AGTTTTGCCCAGTCACCAAG |
60.149 |
20 |
159 |
422 |
580 |
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