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Simple sequence repeat (SSR)
>UN29666
GGGGGTCACACGCGATCTTAGTGCCCATTTCTCTCTTTTGTCTTTCCTCTCTCTCTCTCTCCCTTGTAAGAAAGGAAAGCTCTTTTCGCAAAAA
GATCCAATTTTGACGATCCAAATCGGACAAAAGTTGAATTTTCAGACAGAGATATGTCGTGTTCATCCTCGTCTGGATCAGAAGGTGAAGAAGA
AGGCTTCGATTCTTACCGTAAAGGTGGATACCACGCCGTCAGGATTGGAGACCCTTTCTCCGGTGGACGTTACATCGCTCAGAGAAAGCTTGGT
TGGGGTCAATTCTCCACCGTCTGGCTTGCCTACGATACTCTCTCCTCTAGCTACGTTGCTTTGAAGATTCAGAAGAGCGCACAGCAATTCGCAC
AAGCGGCGCTTCACGAAATCGAGTTCCTCTCAGCTGCAGCAGGCGGAGATCTCCAAAACACCAAATTCGTTGTCCGTCTCATCGACCATTTCAA
GCACGCCGGCCCCAACGGGCAGCATCTGTGCATGGTGCTCGAGTTTCTCGGCGACAGCTTGCTCCGTTTGATCAGATACAACCGTTACAAAGGT
CTGAAGATGGATAAAGTCAGGGAGATTTGCAGATGCGTGCTCACCGGTTTGGATTACTTGCACCGTGAGCTCGGTATGATCCACTCTGATTTAA
AGCCTGAGAATATTCTTCTCTGCTCCACCATTGACCCTGCTAAAGATCCGGTTAGATCCGGGTTAACTCCGTTGCTAGAAAAGCCTGAGGGGAA
CGCAAACGGTGGTGGTGGCTCTTCCACTATGAATCTGATTGAGA |
Primers for UN29666 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGGTCACACGCGATCTTAGT |
60.142 |
20 |
GGAGAAAGGGTCTCCAATCC |
59.874 |
20 |
247 |
3 |
249 |
2 |
GGGTCACACGCGATCTTAGT |
60.142 |
20 |
CGTGGTATCCACCTTTACGG |
60.241 |
20 |
221 |
3 |
223 |
3 |
GGGTCACACGCGATCTTAGT |
60.142 |
20 |
CCAAGCTTTCTCTGAGCGAT |
59.717 |
20 |
279 |
3 |
281 |
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