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Simple sequence repeat (SSR)
>UN30055
CGCAAATTGAGATTTCATATACACCAAAGGGAGGATACATCCCATAAACAGTCCAACTTCTCACACGATCTTTTAAAATAAAAAAAATCGGTTC
AGGATTTTTATTATATTAACAAAAGAAAAAAAAAAAGTTATTGCCTTTACCTATGAGAGCCAGTGTGGTCCGAACCATCTCTTCCCTCTTTGCT
TCTTCTTCTCAGCATTAGACACGACGAAAATTCTTGTTTCCGACTAAAGTATCCGATTGCAATCTGCCGTCACTGAAGCCTCGATTCCCTTTAA
TGTGGAAAAACCAAAGTCGGTCAGTAATCATTCTCTTTCCTTCAAAATCATAACAAAATTATAACGAAATTTTAGGGATTTTATTGTAATTGTT
GCAGTAGTAGCGGTTAGTGCGGTAGTTAGTTAGGTTTAGAAGAATGACAACAACAAGTGGGTCTAATTCTAATCACAACAACCGCCACGACGAT
GGTTCTGTAACCAACAATAACAATAACAATAACCCTAGTACGAGGTCTTGGGGCACGGTGGTTTCAGCTCAATCCGTGTCAACTAGCGGCGGCA
GTATGGGATCCCCCTCGAGCCGGAGCGAACAAACCACCACCTTGGCTACTACTACTACTACATCTGCTACCGACAGTGCCTTTCTACAGCTCAA
TAATTTGGATATTCAGGGTGACGATGCTGCTTCTCAAGGACCTTCTGGGTATGTTTACTTTCACCCCCCCCCCCCTCTC |
Primers for UN30055 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTAATCACAACAACCGCCA |
60.111 |
20 |
AAGGTCCTTGAGAAGCAGCA |
60.134 |
20 |
259 |
444 |
702 |
2 |
GGTTTCAGCTCAATCCGTGT |
60.119 |
20 |
AAGGTCCTTGAGAAGCAGCA |
60.134 |
20 |
173 |
530 |
702 |
3 |
TCAATCCGTGTCAACTAGCG |
59.864 |
20 |
AAGGTCCTTGAGAAGCAGCA |
60.134 |
20 |
164 |
539 |
702 |
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