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Simple sequence repeat (SSR)
>UN30211
CAGAAAGAATACATCACCAAAATATAAAAGAAGTATACATTATGTTAAGGCGTGTTATTTTAGAAGACGCAGACGCGGCGGCGAGCGTCAACAA
AATACAAGAGAATTAAAATTGACAGGTCATCAATAAACTAAATTAAAGAGTCAAAGGATGACTACAATTAACGCGAGCCACGCATCAGGATATC
TGCGGGAGACGCTGTATTTTACAGCGGCGAAGAAAGCACGGAAAAAATGGGTTGCGTCAGTCGCCGGCGGGAAGTGTATAACAACGCTACCCTT
ACAATTTTCTGGTTTGTTTGTTAAATTTGATAGTTCGCCGCTGACGCTGCGCGTCCGTGAAAAGAACAGAGTTACTCTTATTCAACGACGAAGC
CGCCGCAGAGTTTCTCGTCCTCAGTTCAGCGAGCGAACTCGCTTCCGCAACCACCTCACTCGGACCAACCACCTCAAAGCCCTTCGTCATATGA
ACGTTCCCAACGAGCTGACTCAGCACACCCGATTCCGACACCGAGCTCTTTCTCTTGCGCTGCTGCTGCTGCTGCATCGTCGCCCTCGCGATCT
CGGTGTGCATGGCGCTCGATAGCCTCCTGATCCCTTTCGCTCCACCGATGATAACCGCCGGGTTAATCTTGTTATTACCGTGTTTGAAGAAGAG
GACTGACTCGGGGCTCCGGTTACGAACCCGGGTAAACGGGTCGCCGAGGAACAGTGAGGTCTTCGCGTTGACGAGCATCACGTGCTTGAAGTTG
CGTCTGACTCGTCCGAGTAGCATTGGGTAACAGGCCCATCTCCTCAAGGCAATCGGGACGTCGTGGTCCATGAAGCCCGATAGCGAGTTTTCCG
GGTCCAGCTCGGCCACGTCGAAGCCCACGACCGAGCCGTGAGTCAACTCGTTTGACTCGGTCTCGTTATTATTAGCTCGGTGTGTCTTCTTCCC
CCAGATAGGCTCAGACGCGTCCTTCTTCGATTGGTTCCTCGTAAACCGGGACCAAACCGAGTCGGTCTGATTCGAGTTCCGGTACAGATTAACG
AGTTTCGAGAACGAGTTGTTCTCTTCTTCGATCAAACGGTTGAATCTCTGAGAACTATTACTGAATAGCAAAACGACGTCGGATCGGGAAGTGG
CTCCGGAGCGGTGAAGCAACCGGA |
Primers for UN30211 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCTCAAAGCCCTTCGTCATA |
60.206 |
20 |
ACGCGAAGACCTCACTGTTC |
60.453 |
20 |
279 |
448 |
726 |
2 |
CCTCAAAGCCCTTCGTCATA |
60.206 |
20 |
GCGAAGACCTCACTGTTCCT |
59.455 |
20 |
277 |
448 |
724 |
3 |
CCTCAAAGCCCTTCGTCATA |
60.206 |
20 |
AAGGGATCAGGAGGCTATCG |
60.558 |
20 |
153 |
448 |
600 |
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