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Simple sequence repeat (SSR)
>UN00317
GCTGAAGTCATCATGTTCATATCATATGAGCCGAGGGAAAAAAAGAGAGTACATATGGGTAGCTTTAGAAGTTACAGAGGAAGATAAGTATATA
TTTAAGCAGCCACTGGAGTTTTGAGGGCTTCGAGTATCTTGTCATCTAATTCAAACTTCATCTCCTTCTTGTCTCTGCCAATCTTAACGTACTC
CTCATATCTCTCCTTGAGATCTTCAGGCAGATTAGTTTTACTTTCCCATCCTAATATATCCTTTGCTGCTCTTGGTTCCGCGTAAAAATGCATG
TTTCTGAATGGAAAAGCCTTCTTGGCGTCAACCCCAATGGCTTTAGGGTCGTAATGCACGATCTCAACGGTTTTGCCAGCAGCAGCAGCACAGA
GCTTGGCCATACCGTCAAGAGTGACGGCTCTGTCACTAACGCAGTTGAAGATGTTGCAGGAGGCAGCCTCAGGGTTGGACGCAGCTGAAGTGAG
CATGGAAGACAAGTCTCTGACATGAAATATGTTGGTTAGCTGCAATCCTGATCCTGGTATTGGCACTGGTCTATCCCTCACAATCCTGTCGAAG
AACCATTCTTCGCAGTCTTTGTTGTTGCCAGAACCGATCATGTACTGTGGTCGAAAGGAGGCCCAGTTGGCGAAGGTTTCAGCTAAGTACTTCT
CGACTCCAACGTGACTGCGTCGGCTTTCACTGCGTCCCCTTCAACGTGAGGAGGTGTTCGGTGGACTTGTAGATCCCTGCGCTGCTTATGAACA
AGAACTGCTTCACGCCTGAGCTTTTAGCCCAATCCACCACTGGCCTGACAGTATCCAAATCCTTGCCATTGTTGTCAAGAACAACGTCGAATGT
TTCACCTCCGACCACAGTCGCAACATCGGCTGGGTTTCCCCACACCGTCTTTCCTCCGCCGCTTACAATTTCGGAGAAACGGCTGAAGGGAGTT
TTCTTCATTTTGTCAGAAGATTCTTCTCCGACAGTCATAATGGTGACGGCATGGCCGGCGGAGAGAAGCTCTTTGGCAAAGTAAAAGCCAATGA
CGGCGTGACCGCCGCTGTTGGTGTTGACTATAAGCACATTCTTCTTCTCAGCCTTCACGGTGAATTCCTGAGGAGATGATCTTCGAGAACTCTT
CAGAGAGTGTGTGGTGAAGAGAGAAGCAGAAGAAGAAGAAGAGAGAGAGGAAAAGGAAGATGATGATGAGGGAAGAGAGAAACGGTGGAGAGAC
GGCGGGGTGAGGGTTAGATTATTGATCGGAATAGCTGTTTTGGATGAGAAAAACAGAGAGGATGATGATAAAGCTGCCATGCTTGTTCCCTCAC
TGCTC |
Primers for UN00317 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCTTCTCAGCCTTCACGGT |
59.989 |
20 |
CAAGCATGGCAGCTTTATCA |
59.976 |
20 |
232 |
1076 |
1307 |
2 |
TTCTTCTCAGCCTTCACGGT |
59.989 |
20 |
AGCAGTGAGGGAACAAGCAT |
59.874 |
20 |
245 |
1076 |
1320 |
3 |
CTTCTTCTCAGCCTTCACGG |
60.126 |
20 |
CAAGCATGGCAGCTTTATCA |
59.976 |
20 |
233 |
1075 |
1307 |
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