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Simple sequence repeat (SSR)
>UN30342
AACCTCTCTCTGTCATTTTCTCACTCGCACACAGTCTCTCTCTCTCTAGGAGTCTTTTCTCTGCAATCAAAGCAAAGCTTTCACTCTCTCACTT
TCTCCGAAAACTGTCTCTCTTCCAAGTCTTCTTAAATAGAATAGACAATGTAACCGTCTCTTCTGCAAAACAATGCACCATCAATTCTCAATAT
CTCCACAGAAGATAGCTTGCTTGAGTCACTAGGTGGGCTTACTTGGAAATTAATTAAAAAGAAAGAAAAAATGAAAGGAGAGTCCTTTGGTTTG
ATAGTTGGGATCTCACTTGGTTTAGTAATAGGTGTGGTCTTAGCTCTTTCAGCGCTCTGCTGCTTTATGTTCCATAGGCAGAGATCTCAGATTG
CCAACAACAGTAGTGCCTCCAGACGAACCTCATCCCTTCCCATCAGAGAGAACGGTGCTGATTCTTGCACCATTTTGTCTGATTCCACTCTCGC
TCCTGACTCTCCTGTTAAATCCTCTTCCACCAATGCGAGGTCTCTTTGGCTTGATGGGTTTATTAAGAAGACCAATGTGGTCTCTGCCTCTGGC
ATTTTGGAATATTCTTACAGGGATTTGCAGAAGGCAACGTGTAATTTCACGACTTTGATAGGCCAAGGCGCTTTTGGACCTGTCTACAAAGCTC
AAATGTCCACCGGTGAGACTGTTGCTGTCAAAGTTCTCGCTACTGATTCTAAACAGGGCGAGAAAGAGTTTCACACAGAGGTTATGTTATTGGG
AAGGTTGCATCACCGTAACCTAGTGAACTTGGTCGGCTATTGTGCTGAGAAAGGCCAACACATACTTATATATGTCTATATGAGTAAAGGAAGC
TTAGCTTCTCACTTGTACAGTAAACTACTACTTTACACTCTATATTAATC |
Primers for UN30342 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTGTCATTTTCTCACTCGCA |
59.581 |
21 |
GATGGTGCATTGTTTTGCAG |
60.119 |
20 |
168 |
9 |
176 |
2 |
TCTGTCATTTTCTCACTCGCA |
59.581 |
21 |
GCCCACCTAGTGACTCAAGC |
59.874 |
20 |
218 |
9 |
226 |
3 |
TGTCATTTTCTCACTCGCACA |
60.443 |
21 |
GATGGTGCATTGTTTTGCAG |
60.119 |
20 |
166 |
11 |
176 |
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