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Simple sequence repeat (SSR)
>UN03049
GGGAATTTCTAGCAAGTCAATTCCTATCTGTCAATCTTCTTCACATTTATAGAGCGAGAAAGAAATGGACATTTTTAGAGAGAGAGAGAAAAAG
TAGGCAAGAAAGACGGCCACTGACTGAATAAAAGATCACTCACTCTCATACCCTTTCAAGAGATCTCATCTCCCCCCATCTTTCCTTCCTTCGT
CGCCGGTAGTCAGTTCCTAGCTTTGCTTTGATACGACAATGGGTGCTTCAGGGAGATGGATTAAAGCGTTAGTTGGTTTCACCAAATCTGATAA
GTCAAAGTCTAAAAAGAAGGATGATAATGTGAAGATTGCAAGCAAGAGCAGGTTTGGGAGAAATCATTCTGTTGATTTTGATGCTGAAAAGTTT
CGACATGGATTTGAAGATTCTAATCCGCATAGCAGCATGGTAGATTATGGGGTCTCTACTTCAACTTCAGTGCAATCATATGGTGCTGCTTATG
AAGAACAGAGGAATGAACATATGGCTGCAACGCGGATTCAAACAGCTTTTCGAGCGTTTCTGGCTAGAAGGGCTTTACGAGCATTGAAGGGATT
GGTTAGACTTCAAGCCCTTGTCAGAGGACACGCGGTGAGAAAGCAAGCTGCTGTAACGCTTCGATGCATGCAAGCGTTAGTCAGAGT |
Primers for UN03049 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGAGCGAGAAAGAAATGGACA |
59.066 |
21 |
CTAGGAACTGACTACCGGCG |
59.891 |
20 |
158 |
51 |
208 |
| 2 |
GAGCGAGAAAGAAATGGACA |
58.019 |
20 |
CTAGGAACTGACTACCGGCG |
59.891 |
20 |
157 |
52 |
208 |
| 3 |
AGAGCGAGAAAGAAATGGACA |
59.066 |
21 |
CGACGAAGGAAGGAAAGATG |
59.807 |
20 |
140 |
51 |
190 |
|
|
