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Simple sequence repeat (SSR)
>UN31129
GGAAGCGGGACAGGGAGGCACAAGCCGAACTGCATGTGCACGGTGTGCAGCACAGTGAAGAGGAGGTTCAAAACGCAGATGATGAGGAGGAAGA
AGAGGCAGTTGGGGCGAGAGGAAGCAGCAGCAGCAGCGGATCAGGAGAAGAAGGGGGAGGGTAAAACAGGGAGGATAGATCTGAACAGTGATCC
TTCTAGCAGAGAAGAGGTTGGAGCTGTAAGAAAAGAGGAGAGTGAAAAAAGAGGAGTGGCACAAGTGGGTGATGTTGTAGGAGGAACGGAGTTA
GAAAGAGAGGGTGAGAAAATCGGTGAAGAGTCGAAAGGTGCAAGCTGATATGATACGGAAGAGGACAAAGAAGCTAAACTCATAGCTGTTTTTA
TATAAACATATATATTCTGTAAGAACACCAAGATAAGAAGAGAGAGAGTAAGTAGAGAGGTACAGTTTTATGTTTGCTTTTGAATCAAGAAAAC
AAGAATGGCCATCTTCTGTTTTTACATTTTTTTCCTTTTGGTTTTTTAAGTTGTTATTTTTTCATATGGTCTGAGGTGAGTTTTAGTGTTGTCT
CTATTAATTATATGTTTTGCAGAAAGCAAAATGGTGCTTCGGTGTTTGCTGATATGATGAAATAGTTGATTTGTTTTGTT |
Primers for UN31129 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGAGGAGGTTCAAAACGCA |
59.853 |
20 |
TCACCGATTTTCTCACCCTC |
60.05 |
20 |
251 |
58 |
308 |
| 2 |
GTGCAGCACAGTGAAGAGGA |
60.187 |
20 |
TCACCGATTTTCTCACCCTC |
60.05 |
20 |
264 |
45 |
308 |
| 3 |
AAGAGGAGGTTCAAAACGCA |
59.853 |
20 |
GCACCTTTCGACTCTTCACC |
59.851 |
20 |
266 |
58 |
323 |
|
|
