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Simple sequence repeat (SSR)
>UN31501
AAGACGGGGCGGCGTTGCGGAGAGACATGGTGTTCCGAGGCGACACGGTGATGTCCCTAGCCCATTTTTCGGCGGAGATATTTCAGCGGTTACG
GATGATTCCGTCGTCGGATAGAATCAGAAGCGGCGAGATGTTGCAGCTCGTTTGCTGTTTTCCGCTTCAGCAATTTGGTCGATTCGTGTTATGG
TTCTGGAACTATATCTGTGTTGCTCCGCCAGAAATTGATGATGATTGGGATGACGATGATGATTCATCATCATCATCTTCTTCTTCTTCCTCTT
CGGTTGTTAATCATCGGAACTACTATCATCTTCATTTAGAGTGACCAAATTGCATTTATCAGATCAGTGAACTATCTCAAAAAATTCACTTGGG
TCTATTTTCGGTTGAAGTTTAAAGCTTTGTTGTGTGTGTGTGTGATAATGTGTTTTCCTTGAGATGTCTACTGTTTTCTTGCTGGACTTTTTTT
CTTCAGGTTTGAGGAGTTTAAAGGAATCTAATTCACTATTTTGCAGCCATTTTCAATTGAAGAAAAACCTCTTTCCCCAATAAGCGTGAAAGGT
TTAAAAGTTTCCGAGTGTTCTGAGGTACTTCATATGGGGACCGAACTTCAAAATCTTGAAGAATCCAACTAGTATATCACTAATGTTCCTTCCA
GTTATTTAACTAAGGTGTTTGTTAGAATTCGTTTATGTTTAAAAAGTTGAATATATATTAAAACAATTATGTTTAGTGAACGATTTAATTTATA
GTTTTCCCA |
Primers for UN31501 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGGTTGTTAATCATCGGAAC |
59.815 |
21 |
TTCACGCTTATTGGGGAAAG |
60.067 |
20 |
279 |
282 |
560 |
| 2 |
TCGGTTGTTAATCATCGGAAC |
59.815 |
21 |
TCAATTGAAAATGGCTGCAA |
60.193 |
20 |
249 |
282 |
530 |
| 3 |
TCGGTTGTTAATCATCGGAAC |
59.815 |
21 |
CACGCTTATTGGGGAAAGAG |
59.702 |
20 |
277 |
282 |
558 |
|
|
