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Simple sequence repeat (SSR)
>UN32417
CTTATTTATAAAATCACACATATTACATGTCATTCTCTCAGTTATACAAATATACTCTAAACTTAAGATTAGTTTTAATTATACAATTGAATTG
TTTAAAATATTAATTGCTACAGTAATGATAAGAAAGATTGACCATCGGTGTAGCAACGGAGTCTCTTCACCGGAAAATCATGCCGGAAACCATC
GTATGACGCAGCTGCTCGCCACTCTTCCGCCAGCAAAGCGTCAAGCTCGACCTGATCAACGGCTCCAGTCGCAGCCCCAAGAAACTTGGCGAAT
CCACCGACACGACCCGGAGGTTTGGCTTTCCGGCGACCAGCGCCGACGGGAACATTCCGGAGTGCTCCGCCGGCGGTCCAGTAACACTGACAAC
CTCTGCAGAAGTGTCTTGGTTGTTTAACGTTATAATTATTGAAGTAACAGAACTTAGTCTCCATGCTCTTGCATCTCGGACATGCTATTATCTT
GTCTGGACGCTTCTCCACCGTTAGATCCGATGATGATGATGATCTAACGCTTGTTGTTGTTTGTAGCTCTGGTTGTTGTTGTTGTTGCTGCACT
TCTTTTTTAATGGTCGTTGTTGTGATGTTACTCGCGTTGAATGTAATGGTTTTGCCAAAGAGTTTGATCCCTTGGGAATCTTGGGTCGCCATTG
AGAATGAGAAGAGAGAGTGAAAAGGAGAGTTGTGATTAAGTTTCTTGCGGTCC |
Primers for UN32417 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTTGTCTGGACGCTTCTCC |
60.533 |
20 |
CAAGATTCCCAAGGGATCAA |
59.864 |
20 |
181 |
467 |
647 |
2 |
TCTTGTCTGGACGCTTCTCC |
60.533 |
20 |
AGGGATCAAACTCTTTGGCA |
59.67 |
20 |
170 |
467 |
636 |
3 |
TGTCTGGACGCTTCTCCAC |
59.971 |
19 |
CAAGATTCCCAAGGGATCAA |
59.864 |
20 |
178 |
470 |
647 |
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