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Simple sequence repeat (SSR)
>UN33011
GGCAAAGTGTCTTTCTTTGATGAAAGCCATTGAAGAGAGTTAGTTAGATCATACATGAAGCATGTCCCACCTACGAAATGAATTATCACTAAAC
GCAAGTTTCCAAAAACATAAGATAACATCTTTAATATCGATTGTACTTCTCATAGCTTGCCCCCAAGAAACACACACATTCTCTAACTCCAAAA
ATCTAATCAAGAACATAATGGATTAAGTTCATTTCAGTAGATTACCTGAAACGAATACGCTTGAGATCATTGCCTTCCCTCAGGCAATGAAACA
AACGTGATGAGGACACCAGGCTCCACTTGAGCAACCAATTCTTTAGGGTCTTCTTCTTCCTCCAAGTACACTGTAGGCTCCAACTCAGGGATTC
AGGTGTTCCTTCACCACTCAAGAGACCTTTTAACGTTGATTCCATATCTTTCCCTAGAATCTTTGGTAGAGCAACCGCTTCTTCCAGGTCTCTT
GTACGCATAATGGAACCTCCTAGAAGCTGATGCAGCATCTGAATCACGGTGGTGGTTCCGGTTAGAAGACCCCGAACACGGTTTGCAGCTTTTG
TAAGCACCTGAGGCTTTTACTGCCATGTCTTTTAGCTGTGACGTCAGGGACTTAACGGCTTGCTCAGACCTGGGTGTTCCAAGAACTCTGTCAT
CTTCACCAAGTTATACACGTGAGCATCCCTCTGTATCTCTCTCTCTCTTACCCTCCACCAAGTTTCAATTCGACCTGAGAATGAATCACACTTT
TATCAAATCTAAACCTTTTTCAGGATGAATGCGAGAGAATCAAAGAGAGGATGAGTTGAAAGGAAGAAATCGCACACCTATTTATACTGTAACA
TCACAACATGACAATTGAAGGCGACCTAGTGGATGAGCCC |
Primers for UN33011 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTAACGGCTTGCTCAGACCT |
60.015 |
20 |
CGCCTTCAATTGTCATGTTG |
60.111 |
20 |
254 |
616 |
869 |
2 |
CTTAACGGCTTGCTCAGACC |
60.015 |
20 |
CGCCTTCAATTGTCATGTTG |
60.111 |
20 |
255 |
615 |
869 |
3 |
GGACTTAACGGCTTGCTCAG |
60.015 |
20 |
CGCCTTCAATTGTCATGTTG |
60.111 |
20 |
258 |
612 |
869 |
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