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Simple sequence repeat (SSR)
>UN33027
CGGGAAAAGAGAGTCACTTTTAAGGAATCCAATGTAGGCAAAGTGAAATATTTACTTTCTTCTGACATTTCCTGGAAACCACCAAACTAGTGTC
GAGTGATGGAGAAAGAAGAAAATAACAACTAGATGTCTGAGCAAATCACACGAACGGACAAGACAGAGAGACAAATTATAAATAAAACATGGTA
AAAAGGAGAAACCCACAACAACAGAAAAATAAACAGATGATTCGAGATCAAGTTAAATGTGAGAATAATGCACCTTGGTCTTGTGTGAGTGGTT
CTGGAAATCAAGAAGAGTTGATTCACACGCAGACAAAGAATGTAGGAAGTGCTAGAGACAGAGCGAAAGCAGAGAGGAGAAAGTTTACTATGGA
AAACACACAGGAGAGAGAGAGAAGAGAGAAACAAATGGTTTAATTTCACCAAAGAATTAATCTTTTTATCTTCTTTTATGAAAGAGATATCAAA
TTTGCTTTTCTGTGCTTTGCTGTTTGTTACCTTTTATAAATCATGAAAAATTATTTAAAATAATAATTAGCTAACATTTAACATTTTATAATCG
CTATTAAACTAAGGAATTGCATACTATTAATCATCAGAACATCTGTAAAACTATTTGTTCTTGCTGCCTAGGAGGCTAGGATATTACTATGTTT
GAGACTTCTACAAATATACAAAAAGAAAAGAATATTTAGTATCTATCATGGCTGACCAGCATGACTGACATAACTCGAATCTTAATGAATTCGC
TAACTATTTTGTTATCTAGACATGTTATAGTTGAAAATTTTGTCAGCTAACTATACTCTATAGTAAAGTACATATGGTATTTGTGGTGGATATA
TTCAAACCTTACTCCATTAACTTCATCATGATTTTTTCAACAATTCGACCACCATGATGAATTCACTAAACCTATTATTCCATATTTTCTTGAT
ATATTTAGGTTAAATATATAAAATTTGGTAAC |
Primers for UN33027 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGCGAAAGCAGAGAGGAGA |
59.973 |
20 |
CAGCAAAGCACAGAAAAGCA |
60.316 |
20 |
150 |
343 |
492 |
2 |
ACAGAGCGAAAGCAGAGAGG |
59.891 |
20 |
CAGCAAAGCACAGAAAAGCA |
60.316 |
20 |
153 |
340 |
492 |
3 |
GCGAAAGCAGAGAGGAGAAA |
59.836 |
20 |
CAGCAAAGCACAGAAAAGCA |
60.316 |
20 |
148 |
345 |
492 |
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