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Simple sequence repeat (SSR)
>UN33100
ATAAGTAGAGCAGAGGTACAATGTTAGTCCAAGAATCAACCATATCCTAAAACCCAAGCCCCACACAAGAAAGCAAAGAAAGATCTTTAATTAA
CATCGAAAATGGAAAAGTAAAATATGACTGAGAAGCCAAACACAGAGACACTGTCTTCTTGTAATAGAAGAGAATCTTCTTTCATTAACAAAAT
ACTACTACTACTATCTTCCCTAAATTAACACCAAATAACCAAAGAAAAAGTCCATACGGTTGAGTCTTTTTTCTTAAAATTCCAGAACTGCTCT
AACATTTCTTAATTATAATTCAGGATTGTCCAGAAGCAGAGCTTGATGAAGAGATATTGTTGTCATTGTTTGATCCATTAGGGTTCTTGTTAGT
CTTGGAGAGTTTCTGTTTGAGTTGAACCAGAAGCTGTTGATTTTCTTGGTTCAGAAGCTCAGCTTTCTTCCTCAGCCTCTCATTCTCTTTCATT
ATGTAACAGTTCTCCACATACAGCTTCGAGTTTAGCCTCTCCATTGATTGCTTTCTTTCTTTTGGGAAGGAGTGTTGAGATGCAGAGTTAACCG
AGAGAGAGAGAGAAGCTACTGTGTATAGAAGGTAGAGGGACCC |
Primers for UN33100 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCTCAGCTTTCTTCCTCAGC |
59.459 |
20 |
GGGTCCCTCTACCTTCTATACACA |
59.797 |
24 |
175 |
433 |
607 |
| 2 |
CAGCTTTCTTCCTCAGCCTC |
59.308 |
20 |
GGGTCCCTCTACCTTCTATACACA |
59.797 |
24 |
172 |
436 |
607 |
| 3 |
CTCAGCTTTCTTCCTCAGCC |
59.308 |
20 |
GGGTCCCTCTACCTTCTATACACA |
59.797 |
24 |
174 |
434 |
607 |
|
|
