 |
Simple sequence repeat (SSR)
>UN03188
AAAAGGGGGTTTGGGGTTTGGGTGATGAAGAGAGGGAAAGATGAAGAGAAGATACTGGAACCAATGTTTCCACGGCTTCACGTGAACGATGCAG
ACAAAGGAGGAGGGCCTAGAGCTCCTCCAAGAAACAAGATGGCTCTCTATGAGCAACTCAGCATCCCTTCTCAGAGGTTCAACGATCGTACTAG
TGCTTCCTTTCCCCGTAACACGTCCACCACTTTGGTCTCTCCTGGACCATCTAACCAGGCTTGTGGCGTGGAAAGGAACTTAACTGGCCGAGCA
ACTGACAACTTTGTCTCGCAAATGCCCTTGATGGAAAATGTGCGGACGTCTTCATCACAACAGCGTGGTGACCAGAGGAAAATAGTCAGAGAGG
AAGATGATTTCGCAGTTCCTGTTTTTGTTAACTCGAGAAGATCCGGCAGAAGCAGCAACAAGAGTGGCATTGACAAGGAGAAAGACACCACCTC
AAAACGAGGTGGCTTGGCATCGAGTAGTGGCCGAGTAGATGGTTGTGAAACGACGACACGAGTGGTGGGCGTTAATAATGGAGTTGAGTCTCAT
ATGGCATCAGAAGAAGAAGAAGAAGAAGAAGAAGGTCATAGTGGAGGATACACCTCTCTGCAGCAGATAAATGAAGAAGAGGCAAGTGAGGATG
TTTCTGATGATTCCATGGTGGATTCTGTTTCTAGCGTCGATGTCTCTCCCGATGACGTTGTGGGAGTGTTGGGTCAAAAACGTTTCTGGAGAGC
AAGGAAAGCTATTGCCAATCAACAAAGAGTATTTGCTGTTCAACTGTTTGAGCTGCACAGATTGATTAAGGTTCAAAGACTAATTGCTGCATCA
CCGGATGTTTTGCTGGATGACATCAGTTATCTTGGAAAAGTTGCTGCTCCAGTGAAGAAGCTCCTTCCGTCAGGGTTTATAGTAAAGCCTCCTC
TACCACAGGCTATCAAACGCAGGAGCAGCGGGGACTCGGAGAAGACTGACCAAAACAAAATGGAATGCTCAGCTGAGAACGTAGTTGGGAGGCT
GTCAAACCAAGGTGATCATCATCATCATCAACCTTCCAACTACATGCATTTTGCGACCAACCAACCCACTGCAAATGGATGTTACTATCCTCCT
CCTCCTCAGCATCAGCCTCAGCCTCTTCCTTCCGGAGGAAACCAGCAATGGTTGATCCCTGTAATGTCTCCCTCCGAAGGGCTGATATACAAGC
CGCACCCAGGTCCGGGGCACACAGGGCCTGTCTGTGGAGGGTATTATGGTCATTTCATGCCTGCACCGATGGTCATGGGTAATTTCATGGGTGG
TGGTGGTCAGCCTCCTCCGTTTCACCCGGGCATGGGATTCCCATCTCATGGTAATAATGGCTACTTTCCTCCATATGGTTTCATGATGAACCCT
TACTATTCCGGACAACAACAACAACCACCCAGTGAGCAAATGAACAACAGCATCCAACAACAACAACAACAGAGCTCAGTGAACGAAGCGGCTT
CACAACAACAACAACAACAGCCGACGAAATTTTATCCTCGGGCTAGAAAGAGCAGGCAAGGGAGCACGGGAAGTAGTCCAGAGGGAATAATTTC
TGGTAAGAAGAACTCCTTTCGACCATTTTCAGCGGCGGACAAGATCAACAATGCACCACCTGAGGAAATGATGACGACGACCACAACCACAACA
ACAACCGTTACTCAGACAACAAGAGATGGAGCAGGAGTGACGAGAGTGATCAAGGTGGTTCCCCACAACGCGAATCTGGCGAGTGAGAACGCTG
CAAGAATTTTCAGGTCAATACAAGAAGAGCGTAAACAGTATGACGACGCTTTCGCTGACTACTCTTAAGCCTCTCTCTTTTCTTTTTCTATCCT
ATTTTTAGTAAAATTGTGTTGTTAATGCATTTTAAACTGTGATAGAGATGTTATTCTCCAAATTTGTATAATATTAACGTATGAAAAGCTTGGA
TGTCTATTATATTAAAGTCTTGCAACCATTTGGAAC |
Primers for UN03188 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTGGCCGAGTAGATGGTTGT |
59.997 |
20 |
TGGCAATAGCTTTCCTTGCT |
59.982 |
20 |
273 |
497 |
769 |
| 2 |
ATGGTTGTGAAACGACGACA |
60.008 |
20 |
TGGCAATAGCTTTCCTTGCT |
59.982 |
20 |
261 |
509 |
769 |
| 3 |
GTGGCCGAGTAGATGGTTGT |
59.997 |
20 |
ACGTCATCGGGAGAGACATC |
60.08 |
20 |
220 |
497 |
716 |
|
|
