 |
Simple sequence repeat (SSR)
>UN03188
AAAAGGGGGTTTGGGGTTTGGGTGATGAAGAGAGGGAAAGATGAAGAGAAGATACTGGAACCAATGTTTCCACGGCTTCACGTGAACGATGCAG
ACAAAGGAGGAGGGCCTAGAGCTCCTCCAAGAAACAAGATGGCTCTCTATGAGCAACTCAGCATCCCTTCTCAGAGGTTCAACGATCGTACTAG
TGCTTCCTTTCCCCGTAACACGTCCACCACTTTGGTCTCTCCTGGACCATCTAACCAGGCTTGTGGCGTGGAAAGGAACTTAACTGGCCGAGCA
ACTGACAACTTTGTCTCGCAAATGCCCTTGATGGAAAATGTGCGGACGTCTTCATCACAACAGCGTGGTGACCAGAGGAAAATAGTCAGAGAGG
AAGATGATTTCGCAGTTCCTGTTTTTGTTAACTCGAGAAGATCCGGCAGAAGCAGCAACAAGAGTGGCATTGACAAGGAGAAAGACACCACCTC
AAAACGAGGTGGCTTGGCATCGAGTAGTGGCCGAGTAGATGGTTGTGAAACGACGACACGAGTGGTGGGCGTTAATAATGGAGTTGAGTCTCAT
ATGGCATCAGAAGAAGAAGAAGAAGAAGAAGAAGGTCATAGTGGAGGATACACCTCTCTGCAGCAGATAAATGAAGAAGAGGCAAGTGAGGATG
TTTCTGATGATTCCATGGTGGATTCTGTTTCTAGCGTCGATGTCTCTCCCGATGACGTTGTGGGAGTGTTGGGTCAAAAACGTTTCTGGAGAGC
AAGGAAAGCTATTGCCAATCAACAAAGAGTATTTGCTGTTCAACTGTTTGAGCTGCACAGATTGATTAAGGTTCAAAGACTAATTGCTGCATCA
CCGGATGTTTTGCTGGATGACATCAGTTATCTTGGAAAAGTTGCTGCTCCAGTGAAGAAGCTCCTTCCGTCAGGGTTTATAGTAAAGCCTCCTC
TACCACAGGCTATCAAACGCAGGAGCAGCGGGGACTCGGAGAAGACTGACCAAAACAAAATGGAATGCTCAGCTGAGAACGTAGTTGGGAGGCT
GTCAAACCAAGGTGATCATCATCATCATCAACCTTCCAACTACATGCATTTTGCGACCAACCAACCCACTGCAAATGGATGTTACTATCCTCCT
CCTCCTCAGCATCAGCCTCAGCCTCTTCCTTCCGGAGGAAACCAGCAATGGTTGATCCCTGTAATGTCTCCCTCCGAAGGGCTGATATACAAGC
CGCACCCAGGTCCGGGGCACACAGGGCCTGTCTGTGGAGGGTATTATGGTCATTTCATGCCTGCACCGATGGTCATGGGTAATTTCATGGGTGG
TGGTGGTCAGCCTCCTCCGTTTCACCCGGGCATGGGATTCCCATCTCATGGTAATAATGGCTACTTTCCTCCATATGGTTTCATGATGAACCCT
TACTATTCCGGACAACAACAACAACCACCCAGTGAGCAAATGAACAACAGCATCCAACAACAACAACAACAGAGCTCAGTGAACGAAGCGGCTT
CACAACAACAACAACAACAGCCGACGAAATTTTATCCTCGGGCTAGAAAGAGCAGGCAAGGGAGCACGGGAAGTAGTCCAGAGGGAATAATTTC
TGGTAAGAAGAACTCCTTTCGACCATTTTCAGCGGCGGACAAGATCAACAATGCACCACCTGAGGAAATGATGACGACGACCACAACCACAACA
ACAACCGTTACTCAGACAACAAGAGATGGAGCAGGAGTGACGAGAGTGATCAAGGTGGTTCCCCACAACGCGAATCTGGCGAGTGAGAACGCTG
CAAGAATTTTCAGGTCAATACAAGAAGAGCGTAAACAGTATGACGACGCTTTCGCTGACTACTCTTAAGCCTCTCTCTTTTCTTTTTCTATCCT
ATTTTTAGTAAAATTGTGTTGTTAATGCATTTTAAACTGTGATAGAGATGTTATTCTCCAAATTTGTATAATATTAACGTATGAAAAGCTTGGA
TGTCTATTATATTAAAGTCTTGCAACCATTTGGAAC |
Primers for UN03188 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTGGAAAAGTTGCTGCTCC |
59.993 |
20 |
ACATCCATTTGCAGTGGGTT |
60.24 |
20 |
240 |
877 |
1116 |
| 2 |
TGAGAACGTAGTTGGGAGGC |
60.255 |
20 |
TCGGAGGGAGACATTACAGG |
60.065 |
20 |
192 |
1014 |
1205 |
| 3 |
TGAGAACGTAGTTGGGAGGC |
60.255 |
20 |
CTGATGCTGAGGAGGAGGAG |
60.088 |
20 |
130 |
1014 |
1143 |
|
|
