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Simple sequence repeat (SSR)
>UN33220
CAAACACATCCTTTTATAAACCTCATGCTACATATTTTACACTAACAAGCTCTGATCTTGACGAACATTACACACACACACAAGGAAGGCAAGA
ATCTAAAGCTAACATTCAAGAATCTTCTGTGTCGCTTCGAGTATCCATGTAAACCTCTGTTGATAAATCGATTTCATCCACGATCCTTCCCCTT
TCTAGAACAAATTTCCCTTCTTTGTACTTCTGAGCTTTCTCATGCGCTGATTCATATTTCCAACCAACATTCTGTCCGCAACAGCAGCAGAAAA
TATCAGCAACAGTGTGCATACCAGAAAGCATCATTCTTTCCTCTAAAGGACCCATACTTATGTTCACTCTACATATATCCAAACTCGTTGCATA
AAGACTTGAATTAGAGAGCTAAAAAAGAATGCTTAAGCCTGACATTGTTATATAGTCAAGTGAAACTTTACACAGCTTGACATTGAAGAAACAG
AACAAGCACATAATAATATCAAAGAAGTTTATACTTACGAACGATTGAACAGGTAAGCCTTTCCTCTGCGGCAATGGAAAGACTTGGAGATAAG
ATCATCGGGAAGAGCGAGATGGGTTCTGCAGAACCTGCATCTGTAAGATCTTCCTTCAAGCTCCACCGTGAATATCCTTCCCATTCTTGCTCTC
TTCTTTCTCTCTCGTCTCTGTTTTGTTTCTTACTAGTCACTTACGAACTACCC |
Primers for UN33220 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CACATCCTTTTATAAACCTCATGC |
58.988 |
24 |
TGAATCAGCGCATGAGAAAG |
60.096 |
20 |
238 |
5 |
242 |
| 2 |
CACATCCTTTTATAAACCTCATGC |
58.988 |
24 |
AAGGATCGTGGATGAAATCG |
59.894 |
20 |
178 |
5 |
182 |
| 3 |
CACATCCTTTTATAAACCTCATGC |
58.988 |
24 |
TATTTTCTGCTGCTGTTGCG |
60.155 |
20 |
280 |
5 |
284 |
|
|
