 |
Simple sequence repeat (SSR)
>UN03188
AAAAGGGGGTTTGGGGTTTGGGTGATGAAGAGAGGGAAAGATGAAGAGAAGATACTGGAACCAATGTTTCCACGGCTTCACGTGAACGATGCAG
ACAAAGGAGGAGGGCCTAGAGCTCCTCCAAGAAACAAGATGGCTCTCTATGAGCAACTCAGCATCCCTTCTCAGAGGTTCAACGATCGTACTAG
TGCTTCCTTTCCCCGTAACACGTCCACCACTTTGGTCTCTCCTGGACCATCTAACCAGGCTTGTGGCGTGGAAAGGAACTTAACTGGCCGAGCA
ACTGACAACTTTGTCTCGCAAATGCCCTTGATGGAAAATGTGCGGACGTCTTCATCACAACAGCGTGGTGACCAGAGGAAAATAGTCAGAGAGG
AAGATGATTTCGCAGTTCCTGTTTTTGTTAACTCGAGAAGATCCGGCAGAAGCAGCAACAAGAGTGGCATTGACAAGGAGAAAGACACCACCTC
AAAACGAGGTGGCTTGGCATCGAGTAGTGGCCGAGTAGATGGTTGTGAAACGACGACACGAGTGGTGGGCGTTAATAATGGAGTTGAGTCTCAT
ATGGCATCAGAAGAAGAAGAAGAAGAAGAAGAAGGTCATAGTGGAGGATACACCTCTCTGCAGCAGATAAATGAAGAAGAGGCAAGTGAGGATG
TTTCTGATGATTCCATGGTGGATTCTGTTTCTAGCGTCGATGTCTCTCCCGATGACGTTGTGGGAGTGTTGGGTCAAAAACGTTTCTGGAGAGC
AAGGAAAGCTATTGCCAATCAACAAAGAGTATTTGCTGTTCAACTGTTTGAGCTGCACAGATTGATTAAGGTTCAAAGACTAATTGCTGCATCA
CCGGATGTTTTGCTGGATGACATCAGTTATCTTGGAAAAGTTGCTGCTCCAGTGAAGAAGCTCCTTCCGTCAGGGTTTATAGTAAAGCCTCCTC
TACCACAGGCTATCAAACGCAGGAGCAGCGGGGACTCGGAGAAGACTGACCAAAACAAAATGGAATGCTCAGCTGAGAACGTAGTTGGGAGGCT
GTCAAACCAAGGTGATCATCATCATCATCAACCTTCCAACTACATGCATTTTGCGACCAACCAACCCACTGCAAATGGATGTTACTATCCTCCT
CCTCCTCAGCATCAGCCTCAGCCTCTTCCTTCCGGAGGAAACCAGCAATGGTTGATCCCTGTAATGTCTCCCTCCGAAGGGCTGATATACAAGC
CGCACCCAGGTCCGGGGCACACAGGGCCTGTCTGTGGAGGGTATTATGGTCATTTCATGCCTGCACCGATGGTCATGGGTAATTTCATGGGTGG
TGGTGGTCAGCCTCCTCCGTTTCACCCGGGCATGGGATTCCCATCTCATGGTAATAATGGCTACTTTCCTCCATATGGTTTCATGATGAACCCT
TACTATTCCGGACAACAACAACAACCACCCAGTGAGCAAATGAACAACAGCATCCAACAACAACAACAACAGAGCTCAGTGAACGAAGCGGCTT
CACAACAACAACAACAACAGCCGACGAAATTTTATCCTCGGGCTAGAAAGAGCAGGCAAGGGAGCACGGGAAGTAGTCCAGAGGGAATAATTTC
TGGTAAGAAGAACTCCTTTCGACCATTTTCAGCGGCGGACAAGATCAACAATGCACCACCTGAGGAAATGATGACGACGACCACAACCACAACA
ACAACCGTTACTCAGACAACAAGAGATGGAGCAGGAGTGACGAGAGTGATCAAGGTGGTTCCCCACAACGCGAATCTGGCGAGTGAGAACGCTG
CAAGAATTTTCAGGTCAATACAAGAAGAGCGTAAACAGTATGACGACGCTTTCGCTGACTACTCTTAAGCCTCTCTCTTTTCTTTTTCTATCCT
ATTTTTAGTAAAATTGTGTTGTTAATGCATTTTAAACTGTGATAGAGATGTTATTCTCCAAATTTGTATAATATTAACGTATGAAAAGCTTGGA
TGTCTATTATATTAAAGTCTTGCAACCATTTGGAAC |
Primers for UN03188 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGACAACAACAACAACCAC |
59.897 |
20 |
TGTGGTCGTCGTCATCATTT |
59.967 |
20 |
265 |
1419 |
1683 |
| 2 |
CAACAACAACAACCACCCAG |
59.89 |
20 |
TGTGGTCGTCGTCATCATTT |
59.967 |
20 |
261 |
1423 |
1683 |
| 3 |
CAACAACAACAACCACCCAG |
59.89 |
20 |
TTGTGGTCGTCGTCATCATT |
59.967 |
20 |
262 |
1423 |
1684 |
|
|
