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Simple sequence repeat (SSR)
>UN33300
GTAAACTGAAACCCAGCACAACTCAACAAAAAGAACAAAACTCAAAAGTGACATAAGCAAAAAAAAAGAAAAAGTACAGTATCCATATCAGAAA
CCAAATCCAGTTAAACTTACATAGTTATTACCACAGAGAAAAAGGATTAAAACCCTTTTTGTATAATAACAATAATAAAACAAAAAAAAAACAT
CAAAAGGACCAAGCAAATTCATCATTCCGACCAGTAAAAAGATAAAACGAAGATTGATTACTCAAATTCATCTTCGTCCTTTTGTTTTGTTGAT
TGGGAAAGTAAATCAAGCAACAGAACATTCCCTCGCAAAGTGACCTTTTTCACCACACTTGTAACACTCTCCACCACCTCCACCTGCGTTCCTA
CCGCCACCTCCACCACTTCCTCTCCGGTCACAATCACGAGCCAAGTGACCAGTACCACCACACTCGTAACAAGCACCAGACTGTCTCTTCGTCG
CAAAATCCCTAGCCATGTGTCCGACTCCACCACACGTGTAACAAGTACCACCACCACCACCACCTCCGCCGCTTCCACGTTCACCTCCTCCGGT
TCCTTTCTGAACGCAATCCCTAGCAAAGTGACCAGCTTCACCGCAAGTGTAGCACCCACCGGAGGCTCCTCCACGTTCACCGCCGCCGCTTGAT
TTCTGAACGCAATCCCTAGCCAAGTGACCAGACTCACCACAACTGTAACAAGACGCTCCACGCTCACCGCCGTCTTCATCACGGCAATCCTTAG
CAAGATGACCAGCCTCGCCGCAATTATAACAACTTCCTCCTCCGCCGACGCGTCTAACACCACCGCCGCCGCGAGAGCTAGTCTCCTTCTTACG
GAGAGGAGCACCTCCAGGAGCAGTGACGTCGACGGCTTTGGTCTTCCCGTCGGTTCCCTCTACGACGGAGAACTCGACCAAATCGTCGATGGCT
AGACTCCTGTAACCGTCGGAGACGATGGAGGATTGGTGAACGAAAAGCTCTTCTCCGCCGCCGTCGGGGGTGATGAAACCGTATCCCTTGGAGT
CGTTGAACCAGTTCACCTTCCCGGTAGATCTCGCCGCCGATTGATCCTCTGACGCCATCGGATTGAAGATTTTTTGAGTGATTAGGGTTTGTTG
GTTGAGGTAACCGTCGGCGCGTTTGTGTATATATAGAGAAGCCCTAATTAAGTGGAATCTAATCAAACCCTAATTTGACTGATACACAAACAGA
TGTGAGTGGAGGATTCTTCGGGAGTCC |
Primers for UN33300 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACACTCTCCACCACCTCCAC |
60.006 |
20 |
CTTTGCTAGGGATTGCGTTC |
59.845 |
20 |
247 |
346 |
592 |
2 |
CACGAGCCAAGTGACCAGTA |
59.897 |
20 |
CTTTGCTAGGGATTGCGTTC |
59.845 |
20 |
182 |
411 |
592 |
3 |
ACACTCTCCACCACCTCCAC |
60.006 |
20 |
CACTTTGCTAGGGATTGCGT |
60.27 |
20 |
249 |
346 |
594 |
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