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Simple sequence repeat (SSR)
>UN33466
ATCAAAGTGAGGTTAGGCTTCTCTCTCTCTCTCTCTCCCTCGACGATTGATCTCTGATTTGCCGACCGTGGAACAAGCTCTGTTTTACAAAATA
AATAAAAAATATCAGCCATGTCAAGGGGAGGAACGGTGAGAAGGGTCTCACGTCAAGATATACAACTGGTTCAAAACCTTATAGAACGATGCCT
TCAACTCTACATGAACCAGAAAGAAGTCGTGGAAACTTTACTGGAGCAAGCTAAAATCGAACCTGGTTTCACAGAACTAGTTTGGCAGAAGCTT
GAAGAGGAGAATCGTGAGTTTTTCAAGGCTTACTATCTTAGGCTCATGGTGAAACACCAGATCATGGAGTTCAACAAGCTACTCGAGCAGCAGG
TTCAACACATGCGGCAGATGCATCCAGGTGGAGTCGCTTCCGTCCAAAACACAAACGGTGGTGGTTCTCATATTCAATCAATGAATCAGAAACA
TTTGGGTTATGCCTCTGAGCACACTGATCAATCTTTGAAGTCGATGCCCTCGAGTTTGTCTAATGCATACCTGAATGGATCTTCAACACTCAAT
ACAAATAATGTAACCTCTTCTGTGAACATATCAACCCATGGTAGGAGAGTTGATGCTTCTCCTCCTCCGAATATGATCTCATCATCGCAGACCA
CTACAAACATGCCTGTGATGATGCATGGAATGAATGGAGGAGGAGGAGGAGGGATGATCAAGTCTGAGACTGCCTTTACAAACAACCCTGTTTC
TTCATTCATGTATGGTGGTGGTGAAAGGAACGCCTTGGAAGGGCATTCCACAGTTAGAGGAGACACTTCGATCCTCCCATCTTTTGGTAATGAG
TCCAACAACAACAACAACCAACAACCTCTCAGTGAGACGGTTCTTATGCAGAAGCTGCTACTTTTGGGTTCTTGGGTCAAATCCCTCGGAACTT
TAGCCTCTCTGATCTGACAGCTGATTTTTCTCAGAGCTCAGAGATTCTAGAGAGCTATGATAAGTCACCCTTCCTTGTGCCAGATGCTGAAAAT
TTCCTGGACTCCTGCGACAGGGGAGAATATCAAGGAGATAACAAGAGATTGGAGACCATATTTGAAGGTTTCAGTTATGATAACCTTGGAAGCG
AGTAGTTAGGGTAACAGGTTTTGCTTCACTACTCATGATGTAATATATGTTTGGGTATAACATATTCAGGCCTCTGATCTTTTCCTTGCAACAG
AGACTATTGGGTGGGTGTATAAAATGGAATTTCTATTTTAACATTATTACTTTAGCTTAGAGTTAATAAGTTTGAGATGATCATATGTAATTTC
CAGTGTGTGATTTTGCATCTTTTCTCTTGTGTTTTAGTTTTTCCTTTTTACTTGTTATAATTTTTGTGTCTAAGTGTGATTTAACTGATTATGT
TAAGAATGAAAGTTGTGGTAGTGAAGC |
Primers for UN33466 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCTTCTCCTCCTCCGAATA |
59.91 |
20 |
CAAAAGATGGGAGGATCGAA |
60.006 |
20 |
221 |
618 |
838 |
2 |
GATCTCATCATCGCAGACCA |
59.75 |
20 |
CAAAAGATGGGAGGATCGAA |
60.006 |
20 |
200 |
639 |
838 |
3 |
TGATCTCATCATCGCAGACC |
59.75 |
20 |
CAAAAGATGGGAGGATCGAA |
60.006 |
20 |
201 |
638 |
838 |
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