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Simple sequence repeat (SSR)
>UN33466
ATCAAAGTGAGGTTAGGCTTCTCTCTCTCTCTCTCTCCCTCGACGATTGATCTCTGATTTGCCGACCGTGGAACAAGCTCTGTTTTACAAAATA
AATAAAAAATATCAGCCATGTCAAGGGGAGGAACGGTGAGAAGGGTCTCACGTCAAGATATACAACTGGTTCAAAACCTTATAGAACGATGCCT
TCAACTCTACATGAACCAGAAAGAAGTCGTGGAAACTTTACTGGAGCAAGCTAAAATCGAACCTGGTTTCACAGAACTAGTTTGGCAGAAGCTT
GAAGAGGAGAATCGTGAGTTTTTCAAGGCTTACTATCTTAGGCTCATGGTGAAACACCAGATCATGGAGTTCAACAAGCTACTCGAGCAGCAGG
TTCAACACATGCGGCAGATGCATCCAGGTGGAGTCGCTTCCGTCCAAAACACAAACGGTGGTGGTTCTCATATTCAATCAATGAATCAGAAACA
TTTGGGTTATGCCTCTGAGCACACTGATCAATCTTTGAAGTCGATGCCCTCGAGTTTGTCTAATGCATACCTGAATGGATCTTCAACACTCAAT
ACAAATAATGTAACCTCTTCTGTGAACATATCAACCCATGGTAGGAGAGTTGATGCTTCTCCTCCTCCGAATATGATCTCATCATCGCAGACCA
CTACAAACATGCCTGTGATGATGCATGGAATGAATGGAGGAGGAGGAGGAGGGATGATCAAGTCTGAGACTGCCTTTACAAACAACCCTGTTTC
TTCATTCATGTATGGTGGTGGTGAAAGGAACGCCTTGGAAGGGCATTCCACAGTTAGAGGAGACACTTCGATCCTCCCATCTTTTGGTAATGAG
TCCAACAACAACAACAACCAACAACCTCTCAGTGAGACGGTTCTTATGCAGAAGCTGCTACTTTTGGGTTCTTGGGTCAAATCCCTCGGAACTT
TAGCCTCTCTGATCTGACAGCTGATTTTTCTCAGAGCTCAGAGATTCTAGAGAGCTATGATAAGTCACCCTTCCTTGTGCCAGATGCTGAAAAT
TTCCTGGACTCCTGCGACAGGGGAGAATATCAAGGAGATAACAAGAGATTGGAGACCATATTTGAAGGTTTCAGTTATGATAACCTTGGAAGCG
AGTAGTTAGGGTAACAGGTTTTGCTTCACTACTCATGATGTAATATATGTTTGGGTATAACATATTCAGGCCTCTGATCTTTTCCTTGCAACAG
AGACTATTGGGTGGGTGTATAAAATGGAATTTCTATTTTAACATTATTACTTTAGCTTAGAGTTAATAAGTTTGAGATGATCATATGTAATTTC
CAGTGTGTGATTTTGCATCTTTTCTCTTGTGTTTTAGTTTTTCCTTTTTACTTGTTATAATTTTTGTGTCTAAGTGTGATTTAACTGATTATGT
TAAGAATGAAAGTTGTGGTAGTGAAGC |
Primers for UN33466 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCGATCCTCCCATCTTTTG |
60.006 |
20 |
TTGATATTCTCCCCTGTCGC |
60.036 |
20 |
249 |
819 |
1067 |
2 |
TGGAATGAATGGAGGAGGAG |
60.003 |
20 |
TTGACCCAAGAACCCAAAAG |
59.942 |
20 |
243 |
684 |
926 |
3 |
GGAAGGGCATTCCACAGTTA |
59.933 |
20 |
TTTTCAGCATCTGGCACAAG |
59.988 |
20 |
245 |
789 |
1033 |
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