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Simple sequence repeat (SSR)
>UN33507
GAAAAGATTGTAATGCGATATACAATTTTCTTAATAACAAAAAAAAACAAAAGAAAGAATAAGAACAAAGACAGAGAAAGAAGAACAGAACAAA
AGGAATGAGAAATGGCGTATCGGAGAAGACAAGTGATCACAAGAGCTTCCACATTCAACGACGAGATCTATCACCAAACACCTGATCACGATTA
CGGTGATCTCAAAGGCCACTCCAATAACGGATCCTCCTTCAGATCATCTCAATCTTTCTCTTCTCACTCCTCCCTTGCCGCTCAAGCAATCCGC
GCTTCCTCTTCTCTTAACCCTAATGCCAATCCTCAGGTGCGAGGATTCACGGCTTACGAAGATGCAAACAAGAACGAGAGTCGTGGCTTCTGGG
GAATCCTAGCTCAAAAAGCCAAATCAATCCTCGAGGACGAAGAGGAAGAGCAGCAGGGACAACAAAACGTCGTCGTCTCGGAGCAGCCCTCGAG
TAATAATAATAATAATAACAATCCAACCATACGCAAAAGCATAGACAAGATCACGACGTCTCTGAATCAGATCGGAGACAGCTTCGAGAAAGCG
TTCGAGGAAGGCCGTACGATGGTAGCTTCTCAGATAAGGCGTAAAGGATCGGACCTAATGGATATACCAGAGAATAATCACAACAATCAATCCT
CTGGTTCAAACAGTCCGTGGCAACCGTTAACGCAACCTAACCCACACGAGTCTCAGCTCAAAGCTTCACGTGACGTGGCCATGGCTACAGCGGC
CAAAGCCAAGCTCCTCTTACGCGAGCTCAAGACGGTTAAAGCCGACCTAGCTTTCGCTAAACAACGGTGCTCGCAGCTGGAAGAGGAGAACAAA
CGGTTAAGAGATAACCGGGAGAAGGGAACCAACAATCCAGCCGATGATGACCTAATCAGGCTTCAGCTCGAGACGTTGCTTGCGGAGAAAGCGA
GATTAGCGCATGAGAACTCGATCTACGCGAGAGAGAACAGGTTCTTGAGAGAGATCGTTGAGTATCATCAGTTAACGATGCAAGATCTTGTTTA
TATCGATGAAGGTATTGAAGAAGTGGCTGAGGTTAATCCTTCGCTCACTAGGACGCTCTCGATGTCTTCGTTCGCTGCTTCTGAATTGCCTGTG
AACTCTCCTTCTCCTTCTCCTTCGTCGTCTCCGGATTCGTCTTCTCGGCTTTCGGTTTCTACGGATGTTTATTATCCAGTGTTGGTTCAGCAGA
GTTCGGCTAGTGATGTTGGTGGTGATGAGAGTCCTAGACCGGTTCGACCACCTTCTTTGGGATACAAGGATGATGTGATCAAGAGACAATCGTC
ACAGATGTCGGTTTAGAAACCCAACAGTTGATTACTTATTACCATTTTGATTTGTGTCTGCTTCGAAAGTCGTTGGTTGTTAACTTGATTCAAT
TTTTGGCTGTCGATTGTAATAGTTTCTTCTTGATTGGTGAGCAATTTTGCCATCCATATCCAATGTAAATCTCTAAGGGGAGTTTTGATTGT |
Primers for UN33507 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGGACAACAAAACGTCGTC |
60.012 |
20 |
ACTCGTGTGGGTTAGGTTGC |
60.035 |
20 |
279 |
431 |
709 |
2 |
AGGGACAACAAAACGTCGTC |
60.012 |
20 |
TTCTCGAAGCTGTCTCCGAT |
60.096 |
20 |
130 |
431 |
560 |
3 |
ACGAAGAGGAAGAGCAGCAG |
59.891 |
20 |
TTCTCGAAGCTGTCTCCGAT |
60.096 |
20 |
148 |
413 |
560 |
|
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