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Simple sequence repeat (SSR)
>UN03215
GGGAGATCGACGAGACGAGACGAGTCTTTTGCGTTCTTCTCATCTTCTCCTTCACATTTCACATTGATTAAAGCTAAAGCTTGGCTGCTTCCTT
TCTCTCTCACTCTCTCTCTCTCTCTCACTTTTCTCGCCGCGGATCCTCTCTTCCTTTGCGTCCATTTTCTCCGAGATATTTTCCCCTACACGAG
CGTCTCGAGATTGATTGGCGAATGATGAGATGAGGAATCGGTAAAATCAAAAATCAAAAAATCAAATAAATTAATAATAATAATAATAATCTGC
AATGTCGTCGACTTCTTTGCAAACGATTGGGGCCATAAAGGCTTATCATCATCAAGCTCAGCATTTGGTTAACAACTATCTCTTGGCTGATCCT
TTTATTCCTTACACTTCTATTCTCACCGGCATGTTCCTCTGCAAAGTGGTCTATGATCTTTGTCACTTCATCAGCAACTCCCATTCCAAGACCT
ATATCATCCTCACCAAGATTCAACGTATCGAATGGAACAACCGTGGTATCTCGACGGTTCATGCTATCTTTATCTCCGCAATGTCCCTCTACTT
TGTCTTCTGGTCCGATCTCTTTTCTGATAGGTGGCACAATGACCTTGTTGTCTTCCGGAGCTCACGTCTTTCCTCTCTTGGTTTAGGGTTATCC
ATTGGTTACTTCATTGCTGATCTTGGCATGATCTTCTGGAAATATCCTTCTTTGGGTGGACTTGAGTATATTGTGCATCACTCGCTCTCGGGGG
TAGCTGTTGCCTACTCCTTGTTTTCTGGGGAAGGACAGTTGTATACATACATGGTCCTCATCTCCG |
Primers for UN03215 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCGACGAGACGAGACGAGT |
60.017 |
20 |
CGCTCGTGTAGGGGAAAATA |
60.089 |
20 |
185 |
6 |
190 |
2 |
GGAGATCGACGAGACGAGAC |
59.952 |
20 |
CGCTCGTGTAGGGGAAAATA |
60.089 |
20 |
189 |
2 |
190 |
3 |
ATCGACGAGACGAGACGAGT |
60.017 |
20 |
AATGGACGCAAAGGAAGAGA |
59.813 |
20 |
155 |
6 |
160 |
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