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Simple sequence repeat (SSR)
>UN03215
GGGAGATCGACGAGACGAGACGAGTCTTTTGCGTTCTTCTCATCTTCTCCTTCACATTTCACATTGATTAAAGCTAAAGCTTGGCTGCTTCCTT
TCTCTCTCACTCTCTCTCTCTCTCTCACTTTTCTCGCCGCGGATCCTCTCTTCCTTTGCGTCCATTTTCTCCGAGATATTTTCCCCTACACGAG
CGTCTCGAGATTGATTGGCGAATGATGAGATGAGGAATCGGTAAAATCAAAAATCAAAAAATCAAATAAATTAATAATAATAATAATAATCTGC
AATGTCGTCGACTTCTTTGCAAACGATTGGGGCCATAAAGGCTTATCATCATCAAGCTCAGCATTTGGTTAACAACTATCTCTTGGCTGATCCT
TTTATTCCTTACACTTCTATTCTCACCGGCATGTTCCTCTGCAAAGTGGTCTATGATCTTTGTCACTTCATCAGCAACTCCCATTCCAAGACCT
ATATCATCCTCACCAAGATTCAACGTATCGAATGGAACAACCGTGGTATCTCGACGGTTCATGCTATCTTTATCTCCGCAATGTCCCTCTACTT
TGTCTTCTGGTCCGATCTCTTTTCTGATAGGTGGCACAATGACCTTGTTGTCTTCCGGAGCTCACGTCTTTCCTCTCTTGGTTTAGGGTTATCC
ATTGGTTACTTCATTGCTGATCTTGGCATGATCTTCTGGAAATATCCTTCTTTGGGTGGACTTGAGTATATTGTGCATCACTCGCTCTCGGGGG
TAGCTGTTGCCTACTCCTTGTTTTCTGGGGAAGGACAGTTGTATACATACATGGTCCTCATCTCCG |
Primers for UN03215 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TATTTTCCCCTACACGAGCG |
60.089 |
20 |
CCAAATGCTGAGCTTGATGA |
59.948 |
20 |
180 |
171 |
350 |
2 |
TTGATTGGCGAATGATGAGA |
60.159 |
20 |
CCAAATGCTGAGCTTGATGA |
59.948 |
20 |
152 |
199 |
350 |
3 |
TCTCTTCCTTTGCGTCCATT |
59.813 |
20 |
CCAAATGCTGAGCTTGATGA |
59.948 |
20 |
210 |
141 |
350 |
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