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Simple sequence repeat (SSR)
>UN33973
ATGTATACAAATTCACTTATATTTTTTTAACATGTTTCATAGATTAAAACAATGGTAGCTGTCTAACTAAACAAACCAAAAAAAAGAAAAAAAA
AAATTTAGCAACAACGACATTTCAACATATCTAAGCAAGTGTAGGGTCTTGCTTTATCCTCGAGTTCGAATGCGGTGGGCAGTGAGTCTAGAGT
ATCGTTGCCGCAACAGACGTTGTGTAGATTCCTCTTTATGCCTCTGCTAAATGGATGCACTCGTTCCGGAATATTCCTCATGTAGGGAATACGT
TTTCGTCTTACAAGTTCATAAGTGCTCTGATTCGTTAGAATGAGGTAGCTGTGAAAAAGCAATAGAAGCAGCACAAATATCATGGAGATCACCA
AGACGAGAAGCAGTAGTATGGTAATTGCATTCTTCCACCAAGGCTTGGCTACGTTACTGAGGTAGTCAATGTACATGATGAGTGTCCAGATGCA
TAGAGCACTCTCTTCACATATGTACCACCAGAATTTACAATGGTTTTTCTGGCCTACACATGTTCCCAGCCAAACACAGTGATGATCAAACTGA
AGAACACATCTATCACAATCATGACAATGCTTGGCTCGCGGAGGCTGCTCCACATGACAATAGCCGCAAGTCAAATTTCTTAAGGATGTCCCTG
GAGGGTACAAGTCAAGAACCATCTTGCCCCAGGAGGAAGTTGGAGTCTTTCTACTACTACCACCACCTGAAGCCGATTCTCCCTCCACATTAAT
AACAAAGCTCCCATTTTTTATTGAGGGGGTAGGTGCGCTTCTGTAAATTGCATCATTCCCGCAAACCTCCCTCATTGCATCAATAACATACCCA
GGTGAAGAGCCAGAAGTCACAAAATACTGAAGAAGCGTGAGAGAAAACAACAACAAGTAAGAAGCTGTGTACCATGGATCTCGCTTAGTTTTGT
CGATGAAGTCAGCATCGCAAACGAAGAGGAAGCCAATGAAGACGAGGTGTATAGCTACTAGTCCCAGTTTCATTAACAGAGAAGATCTTTTCAC
AGGATCAGAGAGGCAAGGGATGTTATCGAGATAGCTGTCTCGGGTTCGATCCCAGGGTCGGAGAATAGGACAGCACACGCCCATGGTTGACTCT
CTCTCTCTCAGGCAATCATTAGGGGGAGAGAGAGATTGAGACAGGGAGGATCGCGCACGAAAGACAAAATAAGATTCTCCAGAAATGCAATCCT
TGTAGACTACTTGTAGCTGTAGAAAATTGATGGGGAGAGAGAGAGAGTAGAGATTAGTTGGCGATTGCCTGATTTTCTCTTTCC |
Primers for UN33973 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGGGTCGGAGAATAGGACA |
60.065 |
20 |
GGCAATCGCCAACTAATCTC |
59.674 |
20 |
205 |
1087 |
1291 |
| 2 |
GATGAAGTCAGCATCGCAAA |
59.955 |
20 |
CGATCCTCCCTGTCTCAATC |
59.612 |
20 |
240 |
942 |
1181 |
| 3 |
CGAAGAGGAAGCCAATGAAG |
59.948 |
20 |
CGATCCTCCCTGTCTCAATC |
59.612 |
20 |
220 |
962 |
1181 |
|
|
