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Simple sequence repeat (SSR)
>UN33973
ATGTATACAAATTCACTTATATTTTTTTAACATGTTTCATAGATTAAAACAATGGTAGCTGTCTAACTAAACAAACCAAAAAAAAGAAAAAAAA
AAATTTAGCAACAACGACATTTCAACATATCTAAGCAAGTGTAGGGTCTTGCTTTATCCTCGAGTTCGAATGCGGTGGGCAGTGAGTCTAGAGT
ATCGTTGCCGCAACAGACGTTGTGTAGATTCCTCTTTATGCCTCTGCTAAATGGATGCACTCGTTCCGGAATATTCCTCATGTAGGGAATACGT
TTTCGTCTTACAAGTTCATAAGTGCTCTGATTCGTTAGAATGAGGTAGCTGTGAAAAAGCAATAGAAGCAGCACAAATATCATGGAGATCACCA
AGACGAGAAGCAGTAGTATGGTAATTGCATTCTTCCACCAAGGCTTGGCTACGTTACTGAGGTAGTCAATGTACATGATGAGTGTCCAGATGCA
TAGAGCACTCTCTTCACATATGTACCACCAGAATTTACAATGGTTTTTCTGGCCTACACATGTTCCCAGCCAAACACAGTGATGATCAAACTGA
AGAACACATCTATCACAATCATGACAATGCTTGGCTCGCGGAGGCTGCTCCACATGACAATAGCCGCAAGTCAAATTTCTTAAGGATGTCCCTG
GAGGGTACAAGTCAAGAACCATCTTGCCCCAGGAGGAAGTTGGAGTCTTTCTACTACTACCACCACCTGAAGCCGATTCTCCCTCCACATTAAT
AACAAAGCTCCCATTTTTTATTGAGGGGGTAGGTGCGCTTCTGTAAATTGCATCATTCCCGCAAACCTCCCTCATTGCATCAATAACATACCCA
GGTGAAGAGCCAGAAGTCACAAAATACTGAAGAAGCGTGAGAGAAAACAACAACAAGTAAGAAGCTGTGTACCATGGATCTCGCTTAGTTTTGT
CGATGAAGTCAGCATCGCAAACGAAGAGGAAGCCAATGAAGACGAGGTGTATAGCTACTAGTCCCAGTTTCATTAACAGAGAAGATCTTTTCAC
AGGATCAGAGAGGCAAGGGATGTTATCGAGATAGCTGTCTCGGGTTCGATCCCAGGGTCGGAGAATAGGACAGCACACGCCCATGGTTGACTCT
CTCTCTCTCAGGCAATCATTAGGGGGAGAGAGAGATTGAGACAGGGAGGATCGCGCACGAAAGACAAAATAAGATTCTCCAGAAATGCAATCCT
TGTAGACTACTTGTAGCTGTAGAAAATTGATGGGGAGAGAGAGAGAGTAGAGATTAGTTGGCGATTGCCTGATTTTCTCTTTCC |
Primers for UN33973 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCAGGCAATCATTAGGGG |
60.029 |
20 |
CAGGCAATCGCCAACTAATC |
60.606 |
20 |
160 |
1134 |
1293 |
| 2 |
TCTCAGGCAATCATTAGGGG |
60.029 |
20 |
ATCAGGCAATCGCCAACTAA |
60.606 |
20 |
162 |
1134 |
1295 |
| 3 |
TCTCAGGCAATCATTAGGGG |
60.029 |
20 |
AATCAGGCAATCGCCAACTA |
60.606 |
20 |
163 |
1134 |
1296 |
|
|
