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Simple sequence repeat (SSR)
>UN34004
CCACAAATGCACATATTATCTCTTTTTTTTGAAACGCAAACTGATATTAATGCATTTAGCACATATTATCTCAAGAAATTTCTTTATCAATTAG
AATCAATCTGTGGACAGCACAAAAATCTACATTATTCAGCTCTAAACTATATAAACCAATAGAAAGTGGAAGCTGAAGATCTCACGTCCCCCTA
ACATTACTCTAAACGACTAGAGATGCTGGTTTAAGCGAACCGAAGAACCCCGAACAAACCGGTTCACAACATGAAAATAAACCGCAAGGCAAAG
GGTGATTATCACCGAAGATTTCGCACCAACATACCCAACCACTTGCCGCCCTCTATCAGTAACCTCTCCACGAACCGAACCGAAACTCCTCCTA
AAGCTCTGCGATGTCTTCAACACCACAGACTCAAGAATCGATCTCATTGTCTCTAACGTCACTCTTCCCGTAACATCGAACATAAACTTCCTGT
TGCTCGGAACCGCTAACGTAGTCGTGAGCGCCTCCGCCCATCCGAAAGAAGAATAAGAAGAAGAAGAATCTCTAACGGTCTCTTCTTCTTCTCC
CGAGTTTGAAGATGTGTACACTTGGTGAGACGTTCTCATGAACGTCTCGAGAGCTCCGTTACAGACCGAGACGAGAACGTCTCGCGCTCCGTCT
CGGTGTTTCGGATTAGTCAAACCGGAGAATATCTGATCGTATGCGTTGACCCCGGCGGTTTTCTCGATGTAGACGGTTACAGCAGAGATGGTGA
ATCTCTCTATGCAATCAGCTAACAGCTCTTTAATCTTCTCATCGCATAACAAACTCATCCATCTAGGTTTCTCCGACGTCGTCGTTTCGAGATT
ACTACTCTCAACCTCGTGGAATCCAAGGACGAGATTCTTCGCGAAGCTACCGACGAGAACCGAGACGAAACCAGTCCCCGCCTCTGAGAACAGA
ACTCTCTCCACCACGCCTGGGTTCGATTCCGCTTCTTCGACGTTGTTATAACCACGGAGGACACCGACGGTTACTGCCTCTGAAACCCTAGATA
TCGAATCGGTGAACTCTTTCGATTTGGCGATTTTCGCGATCTGTTTCAAGCTGTTCGGGATTTCGTCGGAGTCGGATTCGAGGAACTGCTTCAA
GTCTCGGGAGACGAGAGTTATGGTTTCAGATGAGTCGGTGACTAGCTCGGCGAAGGAGGCGATTGATTCGAAGAGGTTCGTGAGACGCTTCCTC
TTCCTCGCGATGTACGGGGAGGTGTAGAATTTGTAAGCTCCGTAGCTCGAGACTCCGAGGAGGGATACTAGAATCAGCCATTTCCTTCTTCTTC
TATGAGGTGGAATCGTACCTAATCGAAGAATGTCCATGAGGCGGGGAGATTTAGGGATTGTGTGAGATGAGCGAGGAGAAGAAAGGGGGAGATG
GTTTTGGTTACGTGATTGATTTGGATTGTGACATGAGTGTCGAGCCAAGAAGTGAGGAGCTCGAAAGGGCGAGAGAGAGAGAGGGGAAAGCGAA
ACAAATAACAAGTTCCC |
Primers for UN34004 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
GAGAAGAAAGGGGGAGATGG |
60.008 |
20 |
GGGAACTTGTTATTTGTTTCGC |
59.884 |
22 |
130 |
1392 |
1521 |
| 2 |
GGAGAAGAAAGGGGGAGATG |
60.008 |
20 |
GGGAACTTGTTATTTGTTTCGC |
59.884 |
22 |
131 |
1391 |
1521 |
| 3 |
TGTGTGAGATGAGCGAGGAG |
60.138 |
20 |
GGGAACTTGTTATTTGTTTCGC |
59.884 |
22 |
147 |
1375 |
1521 |
|
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