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Simple sequence repeat (SSR)
>UN34040
GTGTGGATCGATTCCATAACCATCATCATCATAGTCCGATCATCGTTACTGTTGTAAAGGTTTATCTCTAATCGTTTCAGGGTTAGGTAAACGG
TTTACAAAAAGTTTTCTTACTCTATTGTATGGAGTAAGAAATGCCAGAGTTAAGAAGTGGAGCACGTAGATTGAGACAACCTAGACCTCAGGTG
ATTGATCAGGCAGATAATATCGAGCTTCCTCCTCCTCAGACTACAACAAGGAGACGAGGTGGTGGTGGTGGTAGAGGAAGAGGAACAGCTGCAG
CTTTAGCAAAAGCCGCCGCACCTCCAAGACCGAGTGTTGCTGCCGGTAGGGGTCGAGGCATCAGGTTGATAGATTTAGAAGCAGAGCCTATAGG
TGAACCTGCTTTTAATCAAGTCGAAGGGGGAGCTGATAAGGGTATCGCCATGGAAGGTGGTAGTCCAGAGAAGATAGTTGGTGCCGAAGAAGAT
CCAAGCACAGCTCCAGTCCCTGAAAGGGTACAAGTTGGAAGCTCTCCTGTTTATAAGACCGAGAGGAAACTCGGCAAAGGAGGCTTTGGTCAAG
TTTTTGTCGGTAGAAGGGTGAGTGGTGGCAGTGATAGGATTGGCCCTGATGCAATTGAGGTGGCTCTGAAATTTGAGCACAAAAATAGCAAAGG
ATGCAATTTTGGCCCACCTTATGAGTGGCAAGTGTACAGTAATCTT |
Primers for UN34040 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAGGTGATTGATCAGGCAGA |
59.787 |
20 |
TACCCTTATCAGCTCCCCCT |
59.919 |
20 |
238 |
183 |
420 |
2 |
CAGGTGATTGATCAGGCAGA |
59.787 |
20 |
CTTCCATGGCGATACCCTTA |
59.916 |
20 |
250 |
183 |
432 |
3 |
CAGGTGATTGATCAGGCAGA |
59.787 |
20 |
AACACTCGGTCTTGGAGGTG |
60.151 |
20 |
138 |
183 |
320 |
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