Simple sequence repeat (SSR)
>UN03220
GGGATCGAGAGAGAGAAAGAGAGCGAAAATACAGAGATCGGAATGGATTCGCTGAAAGGAAAAGGCAAAGGATCGAAGGGAGCTTCCTCCTTGG
ACCTCGTCAAGGAATGGACCAATTGGTCTCTGAAAAAGGCCAAAGTCGCGACTCACTACGGATTCATCCCTCTCATCATCGTCATCGGCATGAA
CTCCGATCCCAAGCCCCATCTCTTCCAGCTCCTTAGCCCTGTCTGATCCTCCTATTTCATCATCATCATCATCATCATCATCATCATCCTCAAA
ACTAGATCAAATCAATCGTTTCCGATGTTTCTCTGGTTTGGCTTCATATCTTTACGCGTCGTCTTGGATTCGCCGGATCTGTTTTTATATTTTT
CAGTAGCTAAGTTTTCGAATGTTTTCTATATGCTTCTTATTATACTCACTGTATTGGAATCAATTAGATTATGATAATTTGAGATCGAATTCAT
GCTTTGATTTTGTGTTCGGTGGGATTTTCTTATTCAATGTTTCACTTTTGATTGTTCTTCTTT |
Primers for UN03220 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGCTCCTTAGCCCTGTCTG |
60.149 |
20 |
ATCCAAGACGACGCGTAAAG |
60.27 |
20 |
138 |
214 |
351 |
| 2 |
CAGCTCCTTAGCCCTGTCTG |
60.149 |
20 |
CCAAGACGACGCGTAAAGAT |
60.27 |
20 |
136 |
214 |
349 |
| 3 |
CAGCTCCTTAGCCCTGTCTG |
60.149 |
20 |
CCGAACACAAAATCAAAGCA |
59.706 |
20 |
276 |
214 |
489 |
|
|
