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Simple sequence repeat (SSR)
>UN34887
CAACGGAAACAAACCACCCGTCATATAGAGAGAGGGATTCAACATCTTCACTGATTCTTTCTTCATTTTTTACACACACAAAACAGACAAGAAA
CTGCAGTTCAAACAAATCCCTAAAGCCCCCCTATATTATATAAAACTACAAAACATAAAACCTCTTAGTTAGGACTGGTCTCTGTTCTGTCCTC
TGGGCCAGCAAGCGTCACATTGCAATCACAAGCGAATCTGCGCGCAAGCATGATGGCAGCGTTTCTCTCTCTCTCAGATTCAAAAGCTACCACA
AAGGACACTCCTTTCTTTGCCTGCCAATACACTGCCTGAGCTGCCGCGTTCCCACCTCCTCTCACTCCACATAGCTGCATTGCACTAGAGTAAT
ACTCTTTTGCAATCACCGTCTTTCCCTTGCAAAGTTTAATCCTCATTTTACCAACGTGAAACAAGTGGATAGATTCTGATGTATGGTCTTCCCC
ACTCATCTGAGTCACTACTACATTGAAATCAACATCGTGTTTTCGTACTAATGCCTCCACATAGCTACCCAGTCCAGCAGCTGGATCGATCTTT
CCCACGGTGGATAATGAGAGCGTGTGGCCATTGTAAACGATATCAGCATGCAAGGCTCGTCCAACGTCAAAAGGCTCGGGAGCGTAAACTGATT
TCGTG |
Primers for UN34887 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCTGTTCTGTCCTCTGGGC |
59.986 |
20 |
AGTGCAATGCAGCTATGTGG |
59.895 |
20 |
195 |
174 |
368 |
2 |
CTCTGTTCTGTCCTCTGGGC |
59.986 |
20 |
TATTGGCAGGCAAAGAAAGG |
60.202 |
20 |
138 |
174 |
311 |
3 |
ACATTGCAATCACAAGCGAA |
60.265 |
20 |
TCAGATGAGTGGGGAAGACC |
60.048 |
20 |
276 |
205 |
480 |
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