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Simple sequence repeat (SSR)
>UN35004
TACAGGACCTTGAGCGCTCAACGTTACCTCCTTCTAGCTTGCATTGCACAAAGGTTTTCAAGCATTCATATGCAACTCTTCCTTTTTTTGCTTT
CAACTTCCCACAAAACACAGCTGTCAAATCCTAAACAATGAACATCAAATAAATCCCTCAAAAAATGGCGAAATTCAGAACGAATGTGAATTGC
ATAATCAAAAATTTTACAATATATAGTGTAAACACACGAAACCCTGATTTCGAGATCCAAACTAATCAACCCTAAATTTTGATTTTCACCAGAT
CGAATAGAAACGCCCAATTTCGAAACCCTAATTAGCTCAATCGACGTATTTACATTCAAATCTCGCAAGCAAAAAAAAAACTGAAAATTGAAGA
ACTAGGGTTACTAAATACAAATTCAATTTCGAACTTTTAATAGAAAATAGAAAATCAAAAGAGAAACATGTTTGACCTCAACCAAAAAAAGAGG
AATAATACCTGAGAGAGATGTAAAGATTGAGAGACTGTGATCTGCGAATAATATAGTCGAGAATTTAGAGAAAATTTAACGAAACTGAAGCGGA
AGATTTTTCAGACGAACATTTACGGTTGAACACGGAGAGACAGAGAGAGAGAGGGGAGAGACCAAAAAAAAAAGGAATTTTTATTTTTCTTGTT
TACATTCACATAAAATTAAAAGGAAAAATAAAATGAGAACGTAATAAATTATATTAATTACTTTATGTAAATACTTTTT |
Primers for UN35004 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCGGAAGATTTTTCAGACGA |
60.331 |
20 |
CGTTCTCATTTTATTTTTCCTTTT |
57.234 |
24 |
140 |
560 |
699 |
| 2 |
AGCGGAAGATTTTTCAGACG |
59.452 |
20 |
CGTTCTCATTTTATTTTTCCTTTT |
57.234 |
24 |
141 |
559 |
699 |
| 3 |
GCGGAAGATTTTTCAGACGA |
60.331 |
20 |
ACGTTCTCATTTTATTTTTCCTTTT |
57.968 |
25 |
141 |
560 |
700 |
|
|
